Streptomyces ambofaciens: SAM23877_4024
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Entry
SAM23877_4024 CDS
T04055
Name
(GenBank) DNA mismatch endonuclease vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_4024
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SAM23877_4024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
AKZ57069
UniProt:
A0A0K2AVN4
LinkDB
All DBs
Position
complement(4280837..4281211)
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AA seq
124 aa
AA seq
DB search
MRDTKPEIALRKAVHRLGLRFRLQRRVAPRCTADFVLPRYHVAVFVDGCFWHGCPDHSPR
EFRGPNAALWQEKLETNRQRDRRNTAQATAAGWTVVRIWECEIRRDVERAAQRVVETTDS
NGAG
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
gtgagagacaccaagcccgagatcgccctcaggaaggctgtacaccggttgggcctcagg
ttccgtctccagcggagggtggctccgcggtgcacggccgacttcgtgctccctcgatat
cacgttgctgtcttcgtcgacggttgtttctggcacggctgtcctgaccacagccccagg
gagttccgagggcccaacgccgctctctggcaggagaagctcgagaccaacaggcaacgg
gaccgacgcaacacagcgcaggccacggccgccggatggaccgtggttcggatctgggag
tgcgagattcggcgcgacgttgagagagccgcgcagcgggtggtggagactaccgattcg
aacggcgcggggtga
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