Streptomyces ambofaciens: SAM23877_4045
Help
Entry
SAM23877_4045 CDS
T04055
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SAM23877_4045 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
samb01007
]
SAM23877_4045 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
samb03016
]
SAM23877_4045 (serS)
Enzymes [BR:
samb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SAM23877_4045 (serS)
Amino acid related enzymes [BR:
samb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SAM23877_4045 (serS)
Transfer RNA biogenesis [BR:
samb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SAM23877_4045 (serS)
Prokaryotic type
SAM23877_4045 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
EzrA
DivIC
SKA2
GAS
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
AKZ57090
UniProt:
A0A0K2AVE5
LinkDB
All DBs
Position
4303917..4305341
Genome browser
AA seq
474 aa
AA seq
DB search
MISTRTFPEVAPTAVARTYSGSVRARRLLRSIPYPTSRIKRIFLMHDARALIEMGAEAVR
RLARRGYSLDLSELESLQSRRNQNIRSADELRAESKRVASEVQQTAKQGGDISKLKERAR
ELKDQIRDIEAGQVQVEEQLRDLLLSIPNLPDDAAPDGDSEDFAVEIRRVGTPPAFPFEP
KDHVDLGEAIGILDFARATKLSGPRFAVSRGAGAALERALATLFLDLHTRRHGYVEHAVP
YLVTRKTMTGTGQLPKFEEDLFKTGVADRELFLIPTAEVPLTNLYADEIIPPAELPLALT
AHTPCFRSEAGSYGRDTRGLIRQHQFAKVEIVQMVDPADADATLETMVGHAEACLKELGL
AYRVVKLAAGDTGFSAQLTYDIEVWIPSQNTYREISSVSNFGTFQARRANIRTRGEGGKP
KLVATLNGSGLPVGRTLAALLEQCQQQDGSIVLPESLIPYLGFRRISADGTPEA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgatctcgacacggacgttcccggaggtcgcgccgaccgcggtggcgcggacatattcg
ggatcggtgagggctcggcggttgctacggtcgattccgtatcccaccagccggatcaaa
aggatcttcctcatgcatgatgcccgcgccctaatcgaaatgggtgccgaagcggttcgt
cggctcgctcgtcgcggttactctctggacctgtccgagctggagtccctccagtctcgg
cgcaaccagaacatccgctcggccgacgagctgcgggctgagtccaagcgggtggcgagt
gaggtccagcagacggccaaacagggcggcgacatctccaagctgaaggagcgcgcccgc
gagctcaaggaccagatccgggacatcgaggccgggcaggtgcaggtcgaggaacagctc
cgcgacctcctcctcagcatcccgaacctgccggacgacgcggccccggacggcgactcc
gaggacttcgcggtcgagatccggcgggtcggcactcctccggctttcccgttcgagccg
aaggaccacgtcgacctcggtgaggccatcggcatcctcgacttcgctcgggcgacgaag
ctgtccggcccgcgcttcgcggtctcgcgtggcgccggagcagcgctggaacgtgccctg
gccacgctcttcctcgacctgcacacccgtcggcacgggtacgtcgagcacgcggtcccg
tacctggtcacccgcaagacgatgaccggcacggggcagctgccgaagttcgaggaggac
ctgttcaagaccggcgtcgccgaccgcgagctgttcctgatcccgacggccgaggtgccg
ctgaccaacctctacgccgacgagatcatccctccggccgagctgccgctggcgctcacc
gcgcacacgccgtgcttccggtccgaagcgggctcgtacggccgcgacacccgggggctg
atccgtcagcatcagttcgccaaggtcgagatcgtccagatggtcgacccggcggacgcg
gacgccacgctggagacgatggtcggccacgctgaggcgtgcctgaaggaactcggcctc
gcctaccgcgtcgtcaagctggctgccggtgacactggcttctccgcccagctcacgtac
gacatcgaagtctggatcccgagccagaacacgtaccgagagatctcctcggtctccaac
ttcggcaccttccaggcccgccgggcgaacatccggacccgcggtgagggcggcaagccc
aagctcgtcgccacactcaacggctccggcctccccgtcggccgcaccctggccgctctc
ctcgagcagtgccagcaacaggacggctccatcgtcctgcccgaatcgctcatcccgtac
ctcggcttccgccgtatctcggcggacggaacaccggaggcataa
DBGET
integrated database retrieval system
