Streptomyces ambofaciens: SAM23877_4560
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Entry
SAM23877_4560 CDS
T04055
Symbol
groL
Name
(GenBank) Cpn60 chaperonin GroEL, large subunit of GroESL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAM23877_4560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
samb03019
]
SAM23877_4560 (groL)
03110 Chaperones and folding catalysts [BR:
samb03110
]
SAM23877_4560 (groL)
03029 Mitochondrial biogenesis [BR:
samb03029
]
SAM23877_4560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
samb04147
]
SAM23877_4560 (groL)
Enzymes [BR:
samb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAM23877_4560 (groL)
Messenger RNA biogenesis [BR:
samb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAM23877_4560 (groL)
Chaperones and folding catalysts [BR:
samb03110
]
Heat shock proteins
HSP60 / Chaperonin
SAM23877_4560 (groL)
Mitochondrial biogenesis [BR:
samb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAM23877_4560 (groL)
Exosome [BR:
samb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAM23877_4560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SAM23877_4560 (groL)
Exosomal proteins of breast cancer cells
SAM23877_4560 (groL)
Exosomal proteins of colorectal cancer cells
SAM23877_4560 (groL)
Exosomal proteins of bladder cancer cells
SAM23877_4560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKZ57605
UniProt:
A0A0K2AWW1
LinkDB
All DBs
Position
4806557..4808182
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPALLKKGID
AAVAAVSEDLLATARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISSIGDLLPLLEKVIQ
AGASKPLLIIAEDLEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
ISEEVGLKLDQVGLEVLGTARRITVTKDDTTIVDGAGKRDEVEGRIAQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKERKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGHGHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcgcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggtacgaccaccgccaccgtgctggcccaggccctggtccgc
gagggcctgcgcaacgtcgccgccggtgcctccccggcgctgctgaagaagggcatcgac
gcggccgtcgccgccgtgtccgaggacctcctcgcgaccgcgcgcccgatcgacgagaag
tccgacatcgccgccgtggccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggccatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctcgacgacccctacatcctcatc
aaccagggcaagatctcctccatcggggacctgctgccgctgctggagaaggtcatccag
gcgggcgcctcgaagccgctgctgatcatcgccgaggacctggagggcgaggccctctcc
accctcgtcgtcaacaagatccgcggcaccttcaacgcggtcgccgtcaaggcccccggc
ttcggcgaccgccgcaaggcgatgctgcaggacatggccgtcctcaccggcgccaccgtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcctcgaggtgctcggcaccgcc
cgccgcatcaccgtcaccaaggacgacaccacgatcgtcgacggtgccggcaagcgtgac
gaggtcgagggccgtatcgcccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctcaaggagcgcaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctggtc
cacgccgtcaaggtcctcgagggcaacctcggcaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggctacgtcatcacctccaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtcacc
cgctccgccctggagaacgccgcgtcgatcgcctccctcctcctgacgaccgagaccctg
gtcgtcgagaagaaggaagaggaagagccggccgccgcgggccacggccacggccacgcc
cactga
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