KEGG   Streptomyces ambofaciens: SAM23877_4561
Entry
SAM23877_4561     CDS       T04055                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samb03400]
    SAM23877_4561
Enzymes [BR:samb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAM23877_4561
    5.6.2.6  RNA 3'-5' helicase
     SAM23877_4561
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAM23877_4561
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 DNA_pol3_chi
Other DBs
NCBI-ProteinID: AKZ57606
UniProt: A0A0K2AXI1
LinkDB
Position
complement(4808332..4810473)
AA seq 713 aa
MSADALDLLDPILTHHIVNTLGWRSLRPLQQEAIGPLLAGQDAVLLAPTAGGKTEAAAFP
LLTRAQRQGWKGTGILYVTPLKALLNNLHPRLETYTGWVGRTAELWHGDVASSRRRRILA
QRPDLLLTTPESLEAMLVSTHVDHRSFFSGLHSVVVDEVHAFAGDDRGWHLLAVLERLQR
LVGRPVQRVGLSATVGNPRELLAWLQGSGRGERPGRIVAPGVTLPGPEHSAPAGPPPGDV
ELDYVGSVANAATVIAALHRGEKRLVFCESRRTVEELGEQLRLRGVTTFLSHASLSTDER
RRAEQAFGEARDCVIVSTSTLELGIDVGDLDRVIQLDAPATVASFLQRLGRTGRRHGTRR
NCLFLALDDAGLLSAAALLLAWSRGWVEPVTPPGEPRHLVAQQLLALCLQEHRVGENLWQ
EWWGGLDPFGTAAEPVVRHLVREGYLEQDSGTLFIGPEAERRFGHRHFMNLTASFTAPPE
FTVLSGRTEIGRTDPDLLTEETDGPRKLLLAGRSWLVTYIDWRRRRCFVEPVDEGGRAKW
SGSGAHRVRSFTLARAVRDVLLGDDPPVVLTRRAEAGLAEAREKHADVVHPAGTVITRRG
ANDVRWWTFAGHRANATLAASLPSVVLRHRLVDDRFVRLRDDVTAPSWRAAVADAETGLT
LPEVDPGAVRGLKFAEALPPRLAEATLAARLTDEEGARAALAGPVRFVKGIAP
NT seq 2142 nt   +upstreamnt  +downstreamnt
gtgagcgccgacgcgctggacctgctcgacccgatcctcacccaccacatcgtcaatacg
ctcggctggcgctccctgcggccccttcagcaggaggccatcggaccactgctggccggt
caggacgccgtgctgctggcccccacggccggcggcaagaccgaggccgccgccttcccg
ttgctgacccgcgcccagcggcaggggtggaagggcaccgggatcctctacgtcacgccg
ctcaaggcactcctgaacaacctgcacccgagactggagacatacacgggctgggtgggc
cgaacggcggagctgtggcacggcgacgtcgcgagcagccggcgccgccgcatcctggca
cagcgcccggacctgctgctgaccacgccggagtcgctggaggcaatgctggtcagcacg
catgtggaccaccggtcgttcttctccgggctgcacagcgtcgtggtcgacgaggtgcac
gccttcgcgggtgacgaccggggctggcacctgctcgccgtactggaacgactccagcgg
ctcgtggggcggccggtccagcgcgtgggcctgtccgccaccgtcggcaacccgcgagag
ctgctcgcctggcttcagggatccgggcgcggcgagcggcccggacggatcgtcgccccc
ggagtgacgctgcccggccccgagcactcggctccggccggcccgccgccgggcgatgtg
gaactggactacgtcggatcggtggccaacgcggcaacggtgatcgcggctctgcaccgg
ggtgaaaagcgccttgtgttctgcgagagcaggcgaacggtcgaggagttgggcgagcaa
ctccgcctccggggcgtcaccacgttcctctcccacgcctcgctctccaccgacgaacgt
cggcgggccgagcaggccttcggggaggcccgggactgcgtgatcgtctcgacgagcacc
ctggaactcggtatcgacgtcggtgacctggaccgcgtcatccagctcgacgcgcccgcc
accgtggcttccttcctgcaacgactcggccgcaccgggcgccgtcacggcacccgccgc
aactgcctcttcctcgccctggacgacgcggggctcctgtccgccgccgcactgctcctg
gcgtggtcgcgtggctgggtcgaaccggtgaccccaccgggtgagcctcgacacctcgtg
gcccagcagcttctcgcgctctgtcttcaggagcaccgggtcggagagaacctgtggcag
gagtggtggggcggcctcgacccgttcggcaccgccgccgaaccggtcgtacggcatctg
gtgagagagggctacctggagcaggactcgggcacgctgttcatcgggccggaagccgaa
cggcgcttcggtcatcggcacttcatgaacctgacggcctcgttcacggcaccccccgag
ttcaccgtgctcagcgggcggacggagatcgggcgtaccgatcccgacctgctcaccgag
gagaccgacggcccgcggaagctgctgctggccggccgcagctggctggtgacctacatc
gactggcggcgcagacgctgcttcgtggaacccgtggacgagggcggacgtgccaagtgg
agcggctcgggagcacaccgcgtccggtccttcaccctggcccgcgcggtgcgggacgtg
ctgctcggcgacgacccgcccgtggtcctgacccgccgggcggaggccggactggcggag
gcacgcgagaaacacgcggacgtggtgcatccggcgggcacggtcatcacccgtcgcgga
gccaacgacgtgcgctggtggacctttgccggccatcgggcgaacgccaccctcgccgcg
tccctgccgtcggtcgttctgcgtcaccggctcgtcgacgaccggttcgtgcgactgcgc
gacgacgtgaccgcgccgtcgtggcgagcggcggttgcggacgccgagacgggtctcacc
ctgcccgaggtggaccccggcgcggtccgcggcctgaagttcgccgaagccctccccccg
cgcctggcggaggccaccctcgcggcgcgcctgacggacgaggagggggcccgggcggct
ctcgcgggaccggtgaggttcgtcaagggaatcgccccgtaa

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