Streptomyces ambofaciens: SAM23877_4613
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Entry
SAM23877_4613 CDS
T04055
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03420
Nucleotide excision repair
samb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAM23877_4613 (uvrD)
03430 Mismatch repair
SAM23877_4613 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_4613 (uvrD)
Enzymes [BR:
samb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAM23877_4613 (uvrD)
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAM23877_4613 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SAM23877_4613 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKZ57658
UniProt:
A0A0K2AXG8
LinkDB
All DBs
Position
4881875..4884355
Genome browser
AA seq
826 aa
AA seq
DB search
MSSLFDDSFLASLQPPRGHDEEPPPPPEDEHGPESVPHDLFGGKFDAPPDRDTHYRDGAP
RPALDAAALLEGLNENQRAAVVHSGTPLLIVAGAGSGKTRVLTHRIAHLLAERSVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKRLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELVDEEDFAAQANDGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTSEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQN
YRSTQTILSAANAVIERNESRRPKNLWTNQGAGSQITGYVADTEHDEAQFVADEIDRLTD
AGEAKAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANP
EDSVPLRRILNVPKRGIGDRAEAMIDALAQREKISFPQALRRVDEAYGMAARSSNAVKRF
NTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEFE
QERAEGEETGTLADFLEKVALVADSDQIPDDEDGDGVVTLMTLHTAKGLEFPVVFLTGME
DGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEEI
PAPHLEWKRTGATGPASSAPVSAVAASLSSSRSRSSASGASGFATRRTAEKPTVSLSVGD
RVTHDQFGLGTVVAVKGTGANAEATVDFGEPKPKRLLLRYAPVEKL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcgagcctccagcccccgcgcgggcacgac
gaggaacctccgccgccgcccgaggacgagcacggaccggagtcggtcccgcacgatctg
ttcggcgggaagttcgacgcgcccccggaccgggacacccactaccgggacggcgccccg
cgccccgccctggacgcggccgccctcctggaggggctgaacgagaaccagcgcgccgcc
gtcgtccactccggcaccccgctgctcatcgtggccggcgccggatccggcaagacccgc
gtcctcacccaccgcatcgcccatctgctggccgagcggagcgtccaccccggccagatc
ctcgcgatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcctgcgtccgcatc
ctgcgccgcgagtcgaagcggctcggcttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcgcctcatggcgctggtctgccgcgacctcgacctggacccgaagaagttc
ccgccgaagtccttcagcgccaagatctcgaacctgaagaacgagctggtcgacgaggag
gacttcgccgcccaggcgaacgacggcttcgagaagaccctggcgcaggcgtacgccatg
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacc
gtcaacctgctccgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcggcaccagcgagcaccccgtcgacgtaccgcccgaggccgaggtcccgcccgccgag
ctgtgcgtggtgggcgacgccgaccagtcgatctacgcgttccgcggcgccaccatccgc
aacatcctccagttcgaggaggactacccggacgccacgacgatcctgctggagcagaac
taccgctccacccagaccatcctcagcgccgccaacgcggtcatcgagcgcaacgagtcc
cgccgccccaagaacctgtggaccaaccagggcgcgggctcgcagatcaccgggtacgtc
gccgacaccgagcacgacgaggcccagttcgtcgccgacgagatagaccgcctcacggac
gccggcgaggccaaggccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgc
gtcttcgaagaggtcttcatccgggtcggcctgccctacaaggtcgtcggcggcgtccgc
ttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaacccc
gaggactcggtgccgctgcgccgcatcctcaacgtccccaagcggggcatcggcgaccgc
gccgaggccatgatcgacgccctcgcccagcgcgagaagatcagcttcccgcaggcgctc
aggcgcgtcgacgaggcgtacggcatggccgcgcgctccagcaacgccgtgaagcgcttc
aacacgctgatggaggacctccgtacgatcgtcgagtccggagccggaccggcgaccgtg
ctggaggcgatcctcgaacgcaccggctacctcgccgagttgcaggcctccaccgacccg
caggacgagacccgcatcgagaacctccaggaactcgccgccgtcgccctggagttcgag
caggagcgggccgagggcgaggagaccggaaccctggccgacttcctggagaaggtggcg
ctggtcgcggactccgaccagatcccggacgacgaggacggcgacggtgtcgtcaccctg
atgaccctgcacaccgccaagggcctggagttccccgtcgtcttcctcaccggcatggag
gacggcgtcttcccgcacatgcgcgccctcggccaggccaaggagctggaggaggagcgg
cgcctggcgtacgtcggcatcacgcgcgcccgggagcggctgtacctgacccggtcgacg
ctgcgcagcgcctggggccagccgtcgtacaacccgccctcccgcttcctggaggagatc
ccggccccccacctggagtggaagcgcaccggggcgaccgggcccgcctcctccgcgccc
gtctcggcggtggcggcctcgctgtcctcctcgcgctcccgctcctcggcgtcgggcgcc
tccggcttcgccacgcgccgcaccgcggagaagccgacggtctcgctgtccgtgggcgac
cgcgtcacgcacgaccagttcggactcggcacggtggtcgcggtcaagggcacgggggcg
aacgccgaggcgacggtcgacttcggggagcccaagcccaagcggctgctcctgcggtac
gcgccggtggagaagctctga
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