Streptomyces ambofaciens: SAM23877_4971
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Entry
SAM23877_4971 CDS
T04055
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03420
Nucleotide excision repair
samb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAM23877_4971 (uvrD)
03430 Mismatch repair
SAM23877_4971 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_4971 (uvrD)
Enzymes [BR:
samb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAM23877_4971 (uvrD)
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAM23877_4971 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SAM23877_4971 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
DUF6011
C1_1
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKZ58016
UniProt:
A0A0K2AYP7
LinkDB
All DBs
Position
5273690..5275894
Genome browser
AA seq
734 aa
AA seq
DB search
MTAATHSTLFPQVPDSADAVLDGLDPEQREVATALRGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPSSVLAVTFTNRAAGEMRGRLRQLGAAGVQARTFHSAALRQLQYFWPKAIGGS
LPRLVDRKIQLVADAAAACRIRLERGELRDVTAEIEWSKVTQTVPADYALAAAKAGREAP
RDPAEIAQLYAAYEDLKRGRSVIDFEDVLLLTVAVLQDRHDVAEQVRAQYQHFVVDEYQD
VSPLQQRLLELWLGDRDDVCVVGDASQTIYSFTGATPDHLLDFRSRHPGATVVKLVRDYR
STPQVVHLANGLLSQASGRAADHRLELVSQRPAGPEPVYTEYADEPAEAEGAARRIRELV
DAGVPAAEIAVLFRTNSQSETYEQALADAGVPYQLRGAERFFDRPEVRKAVSSLRAAARF
GGNDSLLDDVVDLPSQVRAVLSGEGWTTQPPAGSGAVRERWESLAALVGLAQDFAAAAAG
ATLSDLVTELDERAGAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYAKTDE
QIEEERRLLYVGVTRARERLHLSWALARSPGGRASRRPSRFLKGLRPGSGAATGRTAAGG
PGGVERGVGSGGAVAAAVPRRTQRTPARCRVCGRTLTDAGELKLMRCEDCPSDMDEGVYE
RLREWRALQAERSGQPAFCVFTDKTLMAIAESVPEGERELARIPGVGARKLNRYGADVLA
ICAGQDGVGLDDDD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccacccttttcccgcaggtaccggactcggccgacgcggtg
ctcgatgggctcgaccccgagcagcgcgaggtggcgaccgccctgcgcggtccggtgtgc
gtgctggcgggcgccgggaccggcaagacccgggcgatcacccaccgcatcgcctacgga
gtgcgcgccggaatcctccagccgtccagcgtgctcgccgtcaccttcaccaaccgcgcc
gccggtgagatgcgcggccggctgcgccagctcggtgccgcgggcgtgcaggcccgcacc
tttcactcggcggcgctgcgccagctccagtacttctggccgaaagcgatcggtggctcc
ctgccccggctcgtcgaccgcaagatccagctcgtcgccgacgcggccgccgcctgccgc
atccgcctcgaacggggtgagctgcgcgacgtcaccgccgagatcgagtggtccaaggtc
acccagaccgtccccgccgactacgccctcgcggcggccaaggccggccgcgaggcaccc
cgcgaccccgccgagatcgcccagctctacgccgcctacgaggacctcaagcgcgggcgc
tccgtcatcgacttcgaggacgtgctgctgctcaccgtggccgtcctccaggaccggcac
gacgtcgccgagcaggtgcgcgcccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagtcccctccagcagcgactgctggagctgtggctcggagaccgcgacgatgtgtgt
gtggtcggtgacgccagccagacgatctattcgttcacgggagcaacccccgaccatctg
ctcgacttccggagccgtcaccccggtgccaccgtcgtcaagctggtccgcgactaccgc
tccaccccgcaggtcgtgcacctcgccaatggccttctctcccaggccagcggccgagcc
gccgaccaccgcctggagctggtctcccagcggcccgcgggccccgagcccgtctacacc
gagtacgccgacgagccggccgaggccgagggcgcggcccgccgcatccgggagcttgtc
gacgcgggagttccggctgccgagatcgcggtgctgttccgcaccaacagccagtccgag
acctacgaacaggctctcgccgacgccggagtcccctaccagctgcggggcgccgagcgc
ttcttcgaccgcccggaggtgcgcaaagccgtcagttccctgcgggccgccgcgcgcttc
ggcggcaacgactccctcctcgacgacgtcgtcgacctgccctcccaggtgcgtgccgtg
ctgtccggggaggggtggaccacgcaacccccggccgggtcgggcgcggtccgcgagcgg
tgggagtcgctggccgccctggtcggtctcgcccaggacttcgccgccgccgcggcgggc
gccacactgagcgacctcgtcaccgagctcgacgagcgggccggcgcccagcacgctccg
acggtgcagggggtcaccctggcctccctgcactcggccaagggactggagtgggacgtc
gtcttcctggtgggtgtcgccgagggcatgatgccgatcacctacgcaaagaccgacgag
cagatcgaggaggagcgccgcctcctctatgtcggcgtcacccgcgcgcgtgagcgcctg
cacctctcctgggcactcgcgcgctcgcccggcggccgggcgagccgccggcccagccgt
ttcctgaaagggctgcggcccggctcaggcgcggcgaccgggcgtacggccgcgggcggc
cccggaggtgtggaacgcggcgtcggaagcgggggcgccgtggccgccgccgttccgaga
cggacccagcggacccctgcccgctgccgggtctgcgggcgcaccctcaccgatgcgggc
gagttgaagctgatgcgctgcgaggactgcccgtccgacatggacgagggcgtctacgag
cggctgcgtgagtggcgcgcgctccaggcggaacgcagtgggcagcccgcgttctgcgtc
ttcaccgacaagacactgatggccatcgccgagtccgtccccgagggcgagcgcgagctg
gcacggatcccgggagtcggggcgcgcaagctcaaccgctacggagccgacgtcctggcc
atctgcgcaggccaggacggagtggggcttgacgacgacgactga
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