KEGG   Streptomyces ambofaciens: SAM23877_5237
Entry
SAM23877_5237     CDS       T04055                                 
Name
(GenBank) Type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:samb02048]
    SAM23877_5237
Enzymes [BR:samb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SAM23877_5237
Prokaryotic defense system [BR:samb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SAM23877_5237
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: AKZ58282
UniProt: A0A0K2AZL3
LinkDB
Position
5558317..5561970
AA seq 1217 aa
MAEQPEYVRTERPLIEQLTAMGWTHLRGGPTAGPATAPRASDRTSFETVVYTDRFKAAVA
RINPRPSDGKPWLSDAQLDHLLALVQGTAPGQGPKERGVAGNLEVTDLLRKGRNARTLPG
WTKGDPEHIRLVDWDGEFGERPDTPGGGNDLLVVSQFRVERKGAAPVTPDLVLFVNGLPW
VVIECKAPLVSGPQGDVRAALDDAVDQVLRYAGVNSPAAVPEFVRFAQVLVATDRDHAET
GTVTAEPRHFAPWRTVAPASEDRVREEVRKPASAALTDQEILVAGMLRPAHLLDLVRDFT
TRLGSGHRTVKLVGRHQQFKAVKALTRKLEERDRKAAAGLAVSHRGGVVWHTQGSGKSLT
MAFLVRHLRSRPALKSHKVVVVTDRIDLEKQIRASLAATEEKVHRAPSVKRARKYLEVDV
GDVVLVTLQKAQRDDTAYDGREESLPDAAPDDEEEGGGDEGYVQNRVANPHHHVVVLVDE
AHRGQDKWQHARWRAMLPRAAFVGFTGTPVISSNRKRSEEIFGPYADTYTLRDAELDRSV
VPVRYEAYAVPLDVIEQAALDARFDEKVPSDPELRAKVLHKFGRRKEILEAPSVIEAKAE
HMLDHWARTALPDRFGAQIATVSRLAAVRYHTALLAARDRLVARLDALDPALIADPMAAR
YADDEERALLMLLPDREVLRTLEAAVVISPAGQGGSDPESWRPWITKSHQDAHIERFKNG
LPPRDITADPAWNVRTHGLQPSGVGTPASGGQVWNVDLDLPADSGPPAPPDTEGGASPET
MAFVVVQSMLLTGFDAPVEQVLYLDCKLSGAGLLQAVARTNRPYPAKKWGQVVDYVGIGP
ELARSLASYDQEHLRHVLGYRNVSVDHLQPDYEGPQPDGRGPDRDGLLLRSDAAAKALLE
DLGAKVTRFLAGQDVTDPGDESQWEDFLGQRLDDPLLRGEFDERVRDFLTALNAVLPDPE
ALKYRELAGQLGTLQYMARRRYLDGREQFSPRRYGAKVRRLISQHIETTGIRQRIPPVEL
TDPEFMERVDANADPRARCSYMTGSLKLRITAKIGGDRAGYQRFSLRLEEIIARMRDDFE
QAAADLARLVGDVAEAEREPENDDGLDSRTERLVLGLLQQHAEDAVREPWPPGTDLIRAA
RGLTVEMSVLVRRPQIHTQIAARNRMRSELCEHLETWLAMDWDDIGDLASHLTELAVERH
EYFLGYRPRDEADGGDT
NT seq 3654 nt   +upstreamnt  +downstreamnt
gtggcggagcagccggagtacgtcaggaccgagcgtccgctgatcgagcagctgacggcg
atgggctggacccatctccggggcggcccgaccgccggacccgccaccgcgccgcgcgcc
tcggaccgtacgagcttcgagaccgtcgtgtacacggaccggttcaaggccgccgtggcc
aggatcaacccgaggccgtctgacgggaaaccctggctgagcgacgcgcagctcgaccat
ctcctcgccctggtccagggcaccgcgccggggcagggcccgaaggaacgcggtgtcgcc
gggaacctggaggtgaccgacctcctgcgcaagggccgcaacgcccgcaccctgccgggc
tggacgaagggcgaccccgaacacatacggctcgtcgactgggacggcgagttcggggag
cgtccggacacgcccggcggcggcaacgacctgctcgtcgtctcccagttccgggtcgag
cggaagggcgccgctcccgtcacgcccgacctcgtgctgttcgtgaacgggctgccctgg
gtggtgatcgagtgcaaggcgcccctggtgtccggacctcagggagacgtgcgggccgcc
ctggacgacgccgtcgaccaggtgctccggtacgcgggtgtcaactccccggccgccgta
cccgagttcgtccgcttcgcgcaggtccttgtcgccaccgaccgcgaccacgccgagacc
ggcacggtcaccgcagaaccccggcacttcgccccctggcgcacggtcgcacccgcgagt
gaggaccgcgtacgcgaggaggtacgcaagcccgcgtcggcagccctcaccgaccaggag
atcctcgtcgccgggatgctgcgccctgcccatctcctcgacctggtacgggacttcacc
acccggctcggaagcggtcaccgtacggtcaaactggtcggccgccaccagcagttcaag
gcggtgaaggcactcacgcggaagctggaggagcgggaccggaaggcggcggccggcctg
gccgtcagccaccggggcggtgtcgtctggcacacccagggctccggcaagagcctgacc
atggcgttcctggtccggcacctgcgcagccgtcccgctctgaagtcgcacaaggtggtc
gtggtcaccgaccgcatcgacctggagaagcagatccgggcgagcctcgccgccaccgag
gagaaggtgcaccgcgcgccgagcgtcaagcgggccagaaagtacctggaggtggatgtc
ggggacgtcgtcctcgtcaccttgcagaaggcgcagcgtgatgacacggcgtacgacggc
cgcgaggagtcactgcccgacgccgctcccgacgacgaagaggagggcggcggggacgag
ggatacgtacagaaccgggtggccaatccgcaccaccatgtcgtcgtcctcgtcgacgag
gcccaccggggccaggacaagtggcagcacgcccgctggcgggccatgctgccgcgcgcc
gcgttcgtgggcttcaccggcaccccggtgatcagcagcaaccgcaaacgcagcgaggag
atcttcgggccgtacgccgacacgtacaccctgcgcgacgccgaactcgaccggtccgtc
gtacccgtccgctacgaggcgtacgccgtaccgctggatgtcatcgaacaggccgccctc
gacgcccggttcgacgagaaggtgccgtccgatccggagctgcgggccaaggtgctgcac
aagttcggccgccgcaaggagattctggaagccccttcggtgatcgaggccaaggccgag
cacatgctcgaccactgggcccgcaccgcgttgcccgaccgcttcggggcgcagatcgcc
accgtctcccggctcgccgccgtccgctaccacaccgcgctgctcgccgcccgcgaccgg
ctggtcgcccgcctggacgcgctcgacccggccctgatcgccgaccccatggctgcgcgc
tacgccgacgacgaggagcgggcgctcctcatgctcctgccggaccgcgaggtactgaga
acgctcgaagcggccgtcgtcatctccccggcgggccagggcggcagcgatccggagtcg
tggcggccttggatcaccaagagccaccaggacgcgcacatcgaacgcttcaagaacggg
ctgcctccgcgagacatcacggccgacccggcatggaacgtcaggacgcacgggctgcag
ccgtccggcgtcggcaccccggcgagcggtggccaggtgtggaacgttgatctcgacctg
cccgcggacagcggaccgcccgcgccgccggacacggagggcggcgcgtcaccggagacc
atggccttcgtggtggtccagtcgatgctgctcaccggcttcgacgcacctgtcgagcag
gtcctctacctggactgcaagctgtccggcgcaggactgctgcaggccgtggcccgcacc
aaccggccctacccggccaagaagtggggccaggtcgtcgactacgtcggcatcggtccc
gaactggcccgctcgctcgcctcctacgatcaggagcacctgcggcacgtcctcggctac
cggaacgtatccgtggaccacctccagccggactacgagggaccgcagccggacggccgc
ggcccggaccgggacggactgctgctgcggtcggatgccgccgccaaggccctcctggaa
gacctcggggcgaaggtcacccgcttcctggccgggcaggacgtcaccgaccccggcgac
gagtcccagtgggaggacttcctcggccaacgcctcgacgatccgctgctgcggggtgag
ttcgacgaacgcgtccgtgacttcctgacggcgctcaacgcggtcctgccggacccggaa
gccctgaagtaccgggagctggcaggccagctgggcacactgcagtacatggccagacgc
cgctacctcgacggccgtgaacagttcagcccgcgccgctacggggccaaggtgcgccgg
ctcatctcgcagcacatcgagaccactgggatccggcagcggatcccacccgtcgaactc
accgacccggagttcatggaacgggtcgacgcgaatgccgacccccgggcgcggtgctcg
tacatgacgggctcgctgaagctgcgcatcaccgcgaagatcggcggcgaccgggcgggc
taccagcggttcagtctccggctcgaagagatcatcgcgcggatgcgggacgacttcgag
caggccgcggcagacctggcacgtctggtcggggacgtggccgaggcggagcgggagccg
gagaacgacgacggcctcgactcccggaccgaacggctggtcctcggactgctccagcag
cacgccgaagacgccgtgcgggaaccgtggccgccgggcaccgatctgatccgggcggcc
cgcggcctcaccgtggagatgtcggtgctcgtccggcggccgcagatacacacgcagatc
gccgcccgcaaccgcatgcgcagcgaactctgtgagcacctggagacctggctcgccatg
gactgggacgacatcggtgatctcgcgagccatctgacggagctggccgtggagaggcac
gagtacttcctcggataccggccgcgcgacgaggcggacggcggggacacctga

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