KEGG   Streptomyces ambofaciens: SAM23877_5309
Entry
SAM23877_5309     CDS       T04055                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU 2
  KO
K03530  DNA-binding protein HU-beta
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:samb03032]
    SAM23877_5309 (hup)
   03036 Chromosome and associated proteins [BR:samb03036]
    SAM23877_5309 (hup)
   03400 DNA repair and recombination proteins [BR:samb03400]
    SAM23877_5309 (hup)
DNA replication proteins [BR:samb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SAM23877_5309 (hup)
Chromosome and associated proteins [BR:samb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SAM23877_5309 (hup)
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SAM23877_5309 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Mitofilin
Other DBs
NCBI-ProteinID: AKZ58354
UniProt: A0A0K2AZA4
LinkDB
Position
5641773..5642432
AA seq 219 aa
MNKAQLVEAIADKLGGRQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGSLSGPPPTISKAA
GKKAAAKKATGAAKKATGAAKKTTATAKKATAKKTTGAAKTATAKKAPAKKSTAKTTTAA
AKKTTAQKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq 660 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagctgggcggccggcagcaggcc
gccgacgctgtcgacgcggtcctggacgccctcgtccgtgcagtggtcgcgggtgaccgg
gtctcggtcaccggcttcggttccttcgagaaggtcgaccgtccggcccgctacgcccgc
aacccgcagacgggcgagcgggttcgggtcaagaagacctccgtaccccgcttccgtgct
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacatcgcg
gtcaagaaggcccccaagggcagcctgtccggtccgccgcccaccatctccaaggccgcg
ggcaagaaggccgccgccaagaaggccacgggcgccgcgaagaaggccacgggcgcggcc
aagaagacgaccgcgacggcgaagaaggccaccgccaagaagaccacgggtgccgcgaag
acggcgacggcgaagaaggcccccgccaagaagtccaccgccaagaccaccaccgcggcg
gccaagaagaccacggcgcagaaggcccccgccaagaaggcgacggccaagaaggccccc
gccaagaagtcgaccgcccgcaagaccaccgccaagaaggccaccgcccgcaagaagtag

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