Streptomyces ambofaciens: SAM23877_5309
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Entry
SAM23877_5309 CDS
T04055
Symbol
hup
Name
(GenBank) DNA-binding protein HU 2
KO
K03530
DNA-binding protein HU-beta
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
samb03032
]
SAM23877_5309 (hup)
03036 Chromosome and associated proteins [BR:
samb03036
]
SAM23877_5309 (hup)
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_5309 (hup)
DNA replication proteins [BR:
samb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAM23877_5309 (hup)
Chromosome and associated proteins [BR:
samb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAM23877_5309 (hup)
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAM23877_5309 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
AKZ58354
UniProt:
A0A0K2AZA4
LinkDB
All DBs
Position
5641773..5642432
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AA seq
219 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQQAADAVDAVLDALVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDIAVKKAPKGSLSGPPPTISKAA
GKKAAAKKATGAAKKATGAAKKTTATAKKATAKKTTGAAKTATAKKAPAKKSTAKTTTAA
AKKTTAQKAPAKKATAKKAPAKKSTARKTTAKKATARKK
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagctgggcggccggcagcaggcc
gccgacgctgtcgacgcggtcctggacgccctcgtccgtgcagtggtcgcgggtgaccgg
gtctcggtcaccggcttcggttccttcgagaaggtcgaccgtccggcccgctacgcccgc
aacccgcagacgggcgagcgggttcgggtcaagaagacctccgtaccccgcttccgtgct
ggtcagggcttcaaggacctggtgagcggctcgaagaagctcccgaagaacgacatcgcg
gtcaagaaggcccccaagggcagcctgtccggtccgccgcccaccatctccaaggccgcg
ggcaagaaggccgccgccaagaaggccacgggcgccgcgaagaaggccacgggcgcggcc
aagaagacgaccgcgacggcgaagaaggccaccgccaagaagaccacgggtgccgcgaag
acggcgacggcgaagaaggcccccgccaagaagtccaccgccaagaccaccaccgcggcg
gccaagaagaccacggcgcagaaggcccccgccaagaaggcgacggccaagaaggccccc
gccaagaagtcgaccgcccgcaagaccaccgccaagaaggccaccgcccgcaagaagtag
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