Streptomyces ambofaciens: SAM23877_5361
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Entry
SAM23877_5361 CDS
T04055
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
samb
Streptomyces ambofaciens
Pathway
samb02020
Two-component system
samb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAM23877_5361 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAM23877_5361 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
samb03021
]
SAM23877_5361 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
samb02035
]
SAM23877_5361 (whiG)
Transcription machinery [BR:
samb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAM23877_5361 (whiG)
Bacterial motility proteins [BR:
samb02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAM23877_5361 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AKZ58406
UniProt:
A0A0K2AZS2
LinkDB
All DBs
Position
5697022..5697864
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AA seq
280 aa
AA seq
DB search
MPQHTSGPERAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDVDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYTTLEARLRRTPSESEVAVEMGIAVEDLHAVFSQLSLANVVAL
EELLHAGGEGGGRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLAGFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggcccgaacgggcggcgatccccccagccgcccgtgacggt
ggcagcgtgcgaccgcccgccccctcgacgctcgacgagttgtggcggtcgtacaaggcg
acgggggacgagcggctgcgggaacagctgatcctgcactactcgcccctggtgaaatat
gtggcaggccgggtgagcgtggggctgccgcccaacgtcgagcaggcggacttcgtctcc
tcgggggtcttcggactgatcgacgcgatcgagaagttcgacgtcgaccgcgagatcaag
ttcgagacgtacgcgatcacccggatccgtggcgcgatgatcgacgaactgcgggcgctg
gactggatcccgcggtcggtccggcagaaggcgcggaacgtggaacgcgcgtacacgacg
ctggaggcgcgactgcgccgcaccccgtcggagagcgaggtggccgtcgagatggggatc
gcggtggaggacctccacgcggttttcagtcagctgtcgctcgccaacgtggtggcgctg
gaggagctgctgcacgccggcggggagggcgggggccggctgagcctcatggacaccttg
gaggacaccgccgccgacaacccggtggaggtcgccgaggaccgtgagctgcgacggctc
ctggcgcgggcgatcaacacgctgcccgagcgggagaagaccgtggtcacgctgtactac
tacgaggggctcacgctcgccgagatcgggaacgtgctcggtgtgacggagagccgggtc
agccagattcacaccaagtcggtgttgcagctgcgcgctaagctggcgggattcggccgc
tga
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