KEGG   Streptomyces ambofaciens: SAM23877_5430
Entry
SAM23877_5430     CDS       T04055                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
samb  Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:samb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:samb03016]
    SAM23877_5430 (truB)
Enzymes [BR:samb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SAM23877_5430 (truB)
Transfer RNA biogenesis [BR:samb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SAM23877_5430 (truB)
 Prokaryotic type
    SAM23877_5430 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 DinB_2 PseudoU_synth_2 DKCLD WHEP-TRS Gp3-like
Other DBs
NCBI-ProteinID: AKZ58475
UniProt: A0A0K2AZC3
LinkDB
Position
5778666..5779571
AA seq 301 aa
MSEKHTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTPTDDAEGEITRSLDASKVTRESIDAAVAELTGEIMQV
PSKVSAIKIDGVRSYKRAREGEEFEIPARPVTVSSFAVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAALGVGGHLTALRRTRVGPYKLDAAKTLDQLQQDLTVMPIADAAG
AAFPRWDVDAKRARLLLNGVRLEMPDVYAGAGAVAVFDPEGRFLALVEEQRGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgagcgagaagcacaccacgcccgacggccttgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtcgtcgccaagatgcggggcatcgcccggacgcggcgcgtcgggcac
gccggcacgctcgacccgatggcgacgggcgtcctggtcctcggggtggagcgggcgacc
aagctcctcgggcacctcgccctcaccgagaaggagtacctgggcaccatcagactcggg
cagacgacgccgaccgacgacgccgagggcgagatcacgaggtcgctcgacgcctcgaag
gtcacccgggagtccatcgacgcggccgtcgccgagctgaccggcgagatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcgtgcggtcctacaagcgggcgcgcgag
ggcgaggagttcgagatccccgcccgcccggtcaccgtctcctccttcgcggtgtacgac
gtccgggacgccgtcgccgaggacggcacccccgtgctggacctggtggtctcggtggtc
tgctcctccggcacctacatccgtgccctggcccgcgacctgggcgcggccctcggcgtc
ggtggccacctcaccgcgctgcgccggacccgcgtcggtccgtacaagctggacgcggcg
aagacgctggaccagctccagcaggacctcaccgtgatgccgatcgcggacgccgccggt
gccgccttcccccgctgggacgtggacgccaagcgggcccggctgctcctcaacggcgtg
cggctggagatgccggacgtctacgcgggcgccggggccgtcgccgtcttcgatcccgag
ggacgcttcctcgcgctcgtggaggagcagcggggcaaggccaagagcctggccgtcttc
ggctga

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