Streptomyces ambofaciens: SAM23877_5456
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Entry
SAM23877_5456 CDS
T04055
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
samb03009
]
SAM23877_5456 (rimO)
Enzymes [BR:
samb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SAM23877_5456 (rimO)
Ribosome biogenesis [BR:
samb03009
]
Prokaryotic type
ribosomal protein modification factors
SAM23877_5456 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AKZ58501
UniProt:
A0A0K2B023
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All DBs
Position
5822440..5823921
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AA seq
493 aa
AA seq
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MPESRTVALVTLGCARNEVDSEELAGRLEADGWKLVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
SGGVHAAHTPRDRRKLLPISPAERQEAGAAVALPGHGPTDLPEGVAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPNLADVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPNVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESASDLAELERFLN
HARLDAIGVFGYSDEEGTEAATYGDKLDEDVVAERLARVSRLAEELVSQRAEERVGATVR
VLVESMDSTDDGDGVRGRAEHQAPETDGQVLLTSGEGLSVGRMVDAKVVGTEGVDLVAEP
LLGSPEWSEEAGR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtctggaggcggacggctggaagctcgtcgaggacgccgag
gaagcggacgtcgccgtcgtgaacacgtgcggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggccacggcagaacgcaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctcgccgaggccctgcccgaggcc
gacggcgtcctgggcttcgacgactacgccgacatctccgaccgcctgcagaccatcctc
agtggtggcgtccacgccgcccacaccccccgcgaccggcgcaagctgctgcccatcagc
cccgccgagcggcaggaggccggagccgccgtcgcactgccggggcacggccccaccgac
cttcccgagggagtcgcccccgcctccggcccccgcgcgccgctgcgccgccgcctggac
ggctccccggtcgcctcggtgaagctggcgtccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgcccgagcgacgtgctgaacgag
acacggtggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatccgcctgctggagtccctgctgccgaacctcgcc
gacgtcgacggcatcgagcgggtgcgcgtcagctacctccagccggccgagatgcgcccg
ggactcatcgacgtcctgacctcgacgccgaaggtggtgccctacttcgacctctccttc
cagcactccgcgccgaacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctcctggacaccatccggagcaaggcccccgaggcgggcgtgcgctccaacttc
atcgtgggcttccccggcgagtccgcctccgacctcgccgagctggagcggttcctgaac
catgcccggctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacggcgacaagctggacgaggacgtcgtggccgagcggctggcgcgggtctcc
cggctggccgaggaactcgtctcgcagcgcgccgaggagcgcgtcggcgcgaccgtgcgc
gtgctcgtcgagtccatggactccaccgacgacggggacggcgtccgcggtcgcgcggag
caccaggcgcccgagacggacggccaggtgctgctcacgagcggcgaaggcctgagtgtc
ggtcgtatggtcgacgcgaaggtggtcggtacggagggtgtcgacctggtggccgaaccg
ctgctgggatcgcccgagtggagtgaggaggccggcagatga
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