KEGG   Streptomyces ambofaciens: SAM23877_5508
Entry
SAM23877_5508     CDS       T04055                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
samb  Streptomyces ambofaciens
Pathway
samb00230  Purine metabolism
samb00240  Pyrimidine metabolism
samb01100  Metabolic pathways
samb01232  Nucleotide metabolism
Module
samb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
samb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:samb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAM23877_5508 (nrdJ)
   00240 Pyrimidine metabolism
    SAM23877_5508 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samb03400]
    SAM23877_5508 (nrdJ)
Enzymes [BR:samb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAM23877_5508 (nrdJ)
DNA repair and recombination proteins [BR:samb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAM23877_5508 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N MqsR_toxin Ribonuc_red_lgN RuvA_C
Other DBs
NCBI-ProteinID: AKZ58553
UniProt: A0A0K2B026
LinkDB
Position
5879460..5882363
AA seq 967 aa
MTETASGPARSSRAKGPKAGKGLRVERVHTTPGVHPYDEVAWERRDVVMTNWRDGSVNFE
QRGVEFPDFWSVNAVNIVTSKYFRGAVGTPQRETGLKQLIDRIVKTYRKAGEDNRYFASP
ADAEIFEHELAYALLHQIFSFNSPVWFNVGTPQPQQVSACFILSVDDSMESILDWYKEEG
MIFKGGSGAGLNLSRIRSSKELLSSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMVI
LDVDHPDIEDFIETKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDTFMKA
VQDGGKFGLTSRMTGEVIEEVDAKALFRKMAEAAWACADPGIQYDDTINHWHTCPESGRI
NGSNPCSEYMHLDNTSCNLASLNLMKFLKDDGKGNQSFDAERFAKVVELVITAMDISICF
ADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSDGGRALAGAITSLMTGTSYRRS
AELAAIVGPYDGYARNAQPHLRVMKQHSDENAKAVRMDDLDTPIWAAATEAWQDVLRLGE
KNGFRNAQASVIAPTGTIGLAMSCDTTGLEPDLALVKFKKLVGGGSMQIVNGTVPQALRR
LGYQEEQIEAIVAHIAENGNVIDAPGLAHEHYEVFDCAMGERSISAMGHVRMMAAIQPWI
SGALSKTVNLPESASVEDVEEVYFEAWKMGVKALAIYRDNCKVGQPLSAKTKSVKEAEKA
EVTEKAEATIRETVEKVVEYRPVRKRLPKGRPGITTSFTVGGAEGYMTANSYPDDGLGEV
FLKMSKQGSTLAGMMDAFSIAVSVGLQYGVPLETYVSKFTNMRFEPAGMTDDPDVRMAQS
IVDYIFRRLALDFLPFETRSALGIHSAEERQRHLETGSYEPSDDELDVEGLAQSAPRAQE
LKAVATPKAEVEAAKPAPQQAHTSAELVEMQLGIQADAPLCFSCGTKMQRAGSCYICEGC
GSTSGCS
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgacagagacggcgagcggtccggcacggagttcccgcgccaagggccccaaggcgggc
aagggcctccgggtcgagcgcgtccacaccactcccggcgtccacccctatgacgaggtg
gcctgggagcgtcgtgacgtcgtcatgaccaactggcgcgacggctcggtcaacttcgag
cagcgcggcgtcgagttccccgacttctggtcggtgaacgcggtcaacatcgtcaccagc
aagtacttccggggtgccgtgggcaccccgcagcgcgagaccggtctcaagcagctgatc
gaccggatcgtgaagacgtaccggaaggccggcgaggacaacaggtacttcgcctcgccc
gccgacgccgagatcttcgagcacgagctggcctacgccctcctgcaccagatcttcagc
ttcaacagccccgtctggttcaacgtcggcacacctcagccgcagcaggtctccgcctgc
ttcatcctgtccgtcgacgactccatggagtcgatcctcgactggtacaaggaagagggc
atgatcttcaagggcggctcgggcgccggcctgaacctctcccggatccgctcctccaag
gagctgctgtcctccggtggcaacgcctccggcccggtctccttcatgcgcggtgccgac
gcctccgccggcacgatcaagtccggtggggccacgcgccgggccgccaagatggtcatc
ctcgacgtcgaccaccccgacatcgaggacttcatcgagaccaaggtcaaggaggaggag
aagatccgcgccctgcgtgacgcgggcttcgacatggacctgggcggcgacgacatcacg
tccgtccagtaccagaacgccaacaactcggtccgcgtgaacgacacgttcatgaaggcc
gtccaggacggcggcaagttcggcctgacgtcccgcatgaccggcgaggtcatcgaggag
gtcgacgccaaggcgctcttccgcaagatggccgaggctgcctgggcctgcgccgacccg
ggcatccagtacgacgacaccatcaaccactggcacacgtgcccggagtccggccgcatc
aacggctcgaacccgtgcagcgagtacatgcacctggacaacacgtcctgcaacctcgcc
tcgctgaacctgatgaagttcctgaaggacgacggcaagggcaaccagtccttcgacgcc
gagcgcttcgccaaggtcgtcgagctcgtcatcaccgcgatggacatctccatctgcttc
gcggacttcccgacccagaagatcggcgagaacacccgcgccttccgccagctgggcatc
ggctacgccaacctcggcgccctgctgatggcgaccggccacgcgtacgactccgacggc
ggccgcgccctggccggtgccatcacctccctgatgaccggcacgtcgtaccgccgctcc
gccgagctcgccgcgatcgtcggcccgtacgacggctacgcccgcaacgcgcagccgcac
ctcagggtcatgaagcagcactcggacgagaacgccaaggccgtccgcatggacgacctg
gacacgccgatctgggccgccgccaccgaggcctggcaggacgtgctgcgcctcggcgag
aagaacggtttccgtaacgcccaggcgtccgtcatcgccccgaccggcaccatcggtctg
gcgatgtcctgcgacaccaccggcctcgagcccgacctcgccctggtcaagttcaagaag
ctggtcggcggcggctcgatgcagatcgtcaacggcaccgtcccgcaggccctgcgccgc
ctgggttaccaggaggagcagatcgaggcgatcgtcgcccacatcgccgagaacggcaat
gtgatcgacgcccccggtctcgcgcacgagcactacgaggtgttcgactgcgccatgggc
gagcgctccatctccgccatgggccacgtccgcatgatggccgcgatccagccgtggatc
tccggggccctctccaagacggtcaacctgccggagtcggcgtccgtggaggacgtcgag
gaggtctacttcgaggcgtggaagatgggcgtcaaggcgctcgccatctaccgcgacaac
tgcaaggtgggccagcccctctccgcgaagaccaagtcggtcaaggaggcggagaaggcg
gaggtcaccgagaaggccgaggcgaccattcgcgagacggtcgagaaggtcgtcgagtac
cgcccggtccgcaagcgcctcccgaagggtcgtcccggcatcaccacctccttcacggtc
ggcggcgccgagggctacatgacggccaactcctacccggacgacggtctcggcgaggtc
ttcctgaagatgtccaagcagggttcgaccctcgcgggcatgatggacgccttctccatc
gcggtctccgtcggcctccagtacggcgtgccgctggagacgtacgtctcgaagttcacc
aacatgcgcttcgagccggccggcatgacggacgacccggacgtgcggatggcgcagtcg
atcgtcgactacatcttccgccgcctggcgctggacttcctgcccttcgagacgcgctcc
gcgctcggcatccactccgccgaggagcgtcagcgccacctggagaccggttcgtacgag
ccgtccgacgacgagctggacgtcgagggcctggcccagtcggctccgcgcgcccaggag
ctgaaggccgtcgccacgccgaaggccgaggtcgaggcggccaagcccgctccgcagcag
gcgcacaccagcgccgagctggtggagatgcagctgggcatccaggccgacgccccgctg
tgcttctcctgcggcacgaagatgcagcgggccggttcctgctacatctgcgagggctgc
ggctcgaccagcggttgcagctga

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