Streptomyces ambofaciens: SAM23877_6227
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Entry
SAM23877_6227 CDS
T04055
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
samb
Streptomyces ambofaciens
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
samb03021
]
SAM23877_6227 (sigF)
Transcription machinery [BR:
samb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAM23877_6227 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_24
GerE
HTH_Crp_2
DUF7343
Sigma70_ECF
MarR
HTH_10
HTH_28
HTH_3
HTH_20
YdaS_toxin
KORA
DUF7342
DUF134
UPF0122
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AKZ59272
UniProt:
A0A0K2B2F0
LinkDB
All DBs
Position
6689349..6690143
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AA seq
264 aa
AA seq
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MPIHVSVKHPHDDAPDTADAFRRLAALPDGPERDAVRDRIVEAWLPMAERLARRFRSRGE
SHEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQDL
RNRVRVAGQDLSQTVSGRGPTVTEIAERADLSEEDVRVGLEALESFTALSLDAELPGTED
GYSLGDALGGPDPALDTVVDREAVRERLAALPERERAILYMRFFDDMTQSRIAEELGISQ
MHVSRLLSRCCNRVREQVLRDQAA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccacgtcagcgtgaagcatccgcacgacgacgcccccgacaccgccgacgcc
ttccgccggctcgccgcccttcccgacggcccggagcgcgacgcggtccgcgaccggatc
gtcgaggcctggctgcccatggccgagcggctcgcgcgacgcttccgcagccgcggcgag
agccacgaggacctgcgccaggtcgcggccctaggcctggtcaaggcggtggaccgctac
gaccccgagcgcggcaacgccttcgagagctacgccgtgccgacgatcaccggcgagatc
aagcgccacttccgcgaccacatgtggaccctgcacgtgccgcgccgggtccaggacctg
cgcaaccgtgtgcgcgtcgccggccaggacctgtcccagaccgtctcgggacgcgggccc
accgtcaccgagatcgccgagcgcgccgacctgagcgaggaggacgtccgggtcggactg
gaggccctggagagcttcacggccctgtcgctggacgcggagctccccggcaccgaggac
ggctactcgctcggcgacgcgctcggcggccccgacccggccctcgacacggtcgtcgac
cgcgaggccgtcagggagcgcctggccgccctgcccgagcgggaacgcgccatcctctac
atgcgcttcttcgacgacatgacccagagccgcatcgccgaggagctcggcatctcccag
atgcacgtctcccggctgctcagccggtgctgcaaccgggtacgggagcaggtgctgcgg
gaccaggcggcgtga
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