Streptomyces ambofaciens: SAM23877_6929
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Entry
SAM23877_6929 CDS
T04055
Symbol
kuB
Name
(GenBank) Non-homologous end joining protein Ku 1
KO
K10979
DNA end-binding protein Ku
Organism
samb
Streptomyces ambofaciens
Pathway
samb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SAM23877_6929 (kuB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_6929 (kuB)
DNA repair and recombination proteins [BR:
samb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SAM23877_6929 (kuB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
Motif
Other DBs
NCBI-ProteinID:
AKZ59974
UniProt:
A0AD07
LinkDB
All DBs
Position
7473335..7474486
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AA seq
383 aa
AA seq
DB search
MARAIWTGVITFGLVSVPVGVFTATQDHTVHFHQLQRGTSDRVRNRRVNERTGEEVDAGD
IVKGYEVGEGEYVVVQPEELDEIAPGRSRTLEITDFVDLDRIAPVYFDRTYYVAPRGEEY
LKVYELLRTALAETGKAGVATFVMRNRQYLTALRAEDEVLVLQTLHWADEVRDPGEELPE
LPSDRAGRGKELDMALRLVEALSGPWDPARYRDTYQERVRELVRAKAEGTEIAVAEEAPG
ATNVVDLMEALRGSLEQAGGEGGQPPDEGRKGDRSSAARKRSSAEEKRRPGKRASAGRTQ
GSAEKKRATKGKEKESAKRKKAGAPSRRTTPKEKRSDLREMSKAELYRRAGDQGIAGRSR
MSRDQLIEALSGTGDRRGRTAAA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcgatctggaccggcgtgatcaccttcgggctggtgtcggtgcccgtcggt
gtgttcacggcgacgcaggaccacacggtccacttccaccagttgcagcgcggcacctcg
gaccgcgtccgcaacaggcgggtcaacgagcgcaccggcgaggaggtcgacgccggtgac
atcgtcaagggttacgaggtgggcgagggcgagtacgtcgtcgtacagcccgaggagctg
gacgagatcgcgcccggccgctcccgcaccctggagatcaccgacttcgtcgacctggac
cggatcgcaccggtctacttcgaccgcacctactacgtcgccccgcgcggcgaggagtac
ctcaaggtctacgagctgctccgtaccgccctcgcggagaccggcaaggccggtgtcgcc
accttcgtcatgcgcaaccggcagtacctgaccgccctccgtgccgaggacgaggtcctg
gtgctccagaccctgcactgggccgacgaggtccgggacccgggcgaggaacttcccgag
ctgccgtcggaccgggcggggcggggcaaggagctggacatggcgctgcgcctggtcgag
gccctgagcggtccctgggaccccgcccgctaccgcgacacgtaccaggagcgggtccgc
gagctggtgcgggcgaaggccgagggcacggagatcgccgtcgcggaggaagcacccggg
gcgacgaacgtcgtcgacctgatggaggccctgcggggcagtctggagcaggccggcggc
gagggcgggcagccgcccgacgaggggcggaagggcgaccggtcgtccgcggcgaggaag
cggtcgtccgcggaggagaagcggaggccggggaagcgggcgtccgctggaaggacgcag
gggtccgcggagaagaaacgggccaccaagggcaaggagaaggagtccgcgaagaggaag
aaggccggagccccctcccgcaggacgactccgaaggagaagcggagcgacctgcgggag
atgagcaaggcggagctctaccggagggccggcgaccaggggatcgccgggcggtcgagg
atgagccgtgaccagctcatcgaggccctcagcggtaccggcgaccgccgcgggaggaca
gccgccgcctga
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