Sinorhizobium americanum: SAMCFNEI73_Ch0165
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Entry
SAMCFNEI73_Ch0165 CDS
T04621
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
same
Sinorhizobium americanum
Pathway
same03030
DNA replication
same03410
Base excision repair
same03420
Nucleotide excision repair
same03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
same00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMCFNEI73_Ch0165 (polA)
03410 Base excision repair
SAMCFNEI73_Ch0165 (polA)
03420 Nucleotide excision repair
SAMCFNEI73_Ch0165 (polA)
03440 Homologous recombination
SAMCFNEI73_Ch0165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
same03032
]
SAMCFNEI73_Ch0165 (polA)
03400 DNA repair and recombination proteins [BR:
same03400
]
SAMCFNEI73_Ch0165 (polA)
Enzymes [BR:
same01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMCFNEI73_Ch0165 (polA)
DNA replication proteins [BR:
same03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAMCFNEI73_Ch0165 (polA)
DNA repair and recombination proteins [BR:
same03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SAMCFNEI73_Ch0165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMCFNEI73_Ch0165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Taq-exonuc
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
APG89501
UniProt:
A0A1L3LHD4
LinkDB
All DBs
Position
171342..174356
Genome browser
AA seq
1004 aa
AA seq
DB search
MKNGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVT
PTHFAVIFDYSSKTFRNTLYDQYKANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEA
DDLIATYARLAEEVGAGVTIVSSDKDLMQLVTANVSMYDSMKDKQITIPDVIEKWGVPPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLSRAGEIKQQKRREAIIANA
EKARLSRELVTLKKDTPLDVPLEDLRLDSQDGPRLIAFLKTMEFNTLTRRVAAATDTDAE
AIEPAHVPVEWGAQAHGPDLDVGEAAGPPPTPASSSATPPRGNAAKAAVSFLTGKGDAEV
SGATPQELARARADYFAKAPFDHSAYVTIRDLETLDRWIADAREAGVLGLETATNSLDPM
RAELVGFSMAFADYRNNPLGGTIRAAYVPLIHRNGVSDLLGGGMVEHQVPVREALSRLKA
LMEDPSVLKVAQNLKYAYLVMRRHGIVLQSFDDTMLMSYVVDAGNGAHGMDSLAERWLGH
VPIPYKDVAGTGKASVSFDFVDIHRATAYAAEDAEVTLRLWHVLKPRLAAKGLTRVYERL
ERPLIAVLAQMEERGITVDRQILSRLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDI
LFGKMGLPGGSKTKTGQWSTSASVLEELAAVGHELPRKIVDWRQLTKLKSTYTDALPGFV
HPETKRVHTCYALAATTTGRLSSSEPNLQNIPVRTAEGRKIRTAFIATPGHRLVSADYSQ
IELRVLAHVADIPQLRQAFADGVDIHAMTASEMFGVPVDGMPSEIRRRAKAINFGIIYGI
SAFGLANQLSIERSEAGEYIKRYFERFPGIRDYMENTKAFAREHGYVETIFGRRAHYPDI
RSSNPSHRAFNERASINAPIQGSAADIIRRAMVKMEPALNAAKLSARMLLQVHDELIFEV
EESEIERTLPVIVSVMENAAMPALNMKVPLKVDARAAQNWDEAH
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggtgatcatctcttcctcgtcgacggctcgggcttcatcttccgggcgttc
cacgccatcccgccgctcaaccgcaagtcggacgggctgccggtcaatgcggtggccggc
ttctgcaacatgctctggaagttgctgaccgatgcgcgcgacacctcggtcggcgtgacg
ccgacgcatttcgcggtgatcttcgattattcctccaagaccttccgcaatacgctttat
gaccagtacaaggcgaaccgcaccgcgccgccggaggacctgatcccgcaattcgggctg
attcgtcacgccacccgcgccttcaacctgccctgcatcgagaaggaaggttacgaggcc
gacgacctgatcgcgacctatgcgcggctggccgaggaggtgggcgccggcgtcaccatc
gtttcctccgacaaggacctcatgcaattggtgaccgccaatgtgtcgatgtacgacagc
atgaaggacaagcagatcaccattcccgacgtcatcgagaaatggggcgtgccgcctgag
aagatgatcgatctccaggcgatgaccggcgattccaccgacaatgttccgggcattccc
ggcatcggccccaagacggcggcgcagctcctcgaagaatatggcgacctcgacacgctg
ctttcgcgggccggcgagatcaagcagcagaagcggcgcgaggcgatcatcgccaatgcc
gagaaggcgcgcctgtcgcgcgagctcgtcaccttgaagaaggacacgccgctcgacgtg
ccgctcgaggatctgcggctcgattcgcaggacggaccgaggctcatcgccttcctgaag
acgatggagttcaacaccttgacgcgccgcgtcgcggcagcgaccgacacggatgcggag
gcaatcgaaccggcgcatgtgccggtcgaatggggggcgcaggcgcatgggcccgatctc
gacgtcggcgaggcggccggtccgccgccgacgccggcctcgtcgagcgccacgccgccg
cgcggcaacgccgccaaggcggcggtttccttccttaccggcaagggcgacgccgaggtc
agcggcgcgacgccccaggaactggcgcgggcgcgcgccgactatttcgccaaggcgcct
ttcgaccattcggcctatgtgacgattcgcgatctcgaaaccctcgaccggtggatcgcc
gatgcgcgcgaggcgggcgttctcggtttggaaacggcgacgaactcgctcgacccgatg
cgggcggaactcgtcggcttctcgatggcgtttgccgattaccgcaacaatccgctaggc
ggcaccatccgcgccgcctatgtgccgctgatccacaggaacggcgtcagcgatctcctc
ggcggtggcatggtggaacaccaggtgccggtgcgcgaggcgctgagccggctaaaggcc
ctgatggaagacccgtcggtgctcaaggtcgcacagaacctgaaatacgcctatctggtc
atgaggcggcacggcatcgtcctgcagagcttcgacgataccatgctgatgtcctatgtg
gtggatgccggcaacggcgcgcacggcatggattcactcgccgagcgttggctcggccat
gtgccaatcccctacaaggacgttgccggcaccggcaaggcgtcggtgagcttcgatttc
gtcgacatccacagggcgaccgcctatgcggccgaggacgcggaggtgacgcttcgcctc
tggcatgtcttgaagccgcggctggccgccaagggcctgacccgcgtctatgagcgcctc
gaaaggccgctgatcgcggtcttggcgcagatggaggagcgcggcatcaccgtcgatcgc
cagatcctctcgcgcctttccggcgagttggcacagggcgccgcagcgctcgaggacgag
atctatcggttggccggcgagaccttcaccatcggctcgccgaagcagctcggcgatatc
ctgtttggcaagatgggcttgccgggcggttcgaagacgaagaccggccaatggtcgacc
tccgcttcggtgctcgaggagcttgccgccgtcggacacgaactgccgcgcaagatcgtc
gactggcgccagctcaccaagctgaaatcgacctataccgacgccttgcccggcttcgtg
catccggagacgaagcgcgtccacacctgctatgcgctcgccgccaccacgacggggcgc
ctttcctcctccgaaccgaacctgcagaacatcccggtcaggaccgccgagggccgcaag
atccgcaccgccttcatcgccaccccgggccacaggctggtgtcggcagattacagccag
atcgaacttcgggtgctcgctcacgtggcggacattccgcagcttcgccaggcctttgcc
gatggtgtcgacatccacgcgatgaccgcatccgagatgttcggggtgccggtggacggc
atgccgagcgagatccggcgccgcgccaaggcgatcaatttcggcatcatctacggcatc
tcggcctttgggctagccaaccagctttcgatcgagcgctcggaagcgggcgagtacatc
aagagatatttcgagcgcttccccggcattcgcgactatatggagaacaccaaggctttt
gcccgcgagcacggctatgtcgagacgatcttcggccgccgcgcccattatccggatatc
cgctcctccaatccatcacaccgcgctttcaacgagcgcgcctcgatcaacgccccgatc
cagggctcggccgccgacatcatccgccgcgccatggtgaagatggaaccggcgctcaac
gcggcgaagctttccgcccgcatgttgctccaggtccacgacgaattgatcttcgaggtc
gaggagagcgaaatcgagcgcacgcttcccgtgatcgtatctgtgatggagaatgccgcc
atgccagcactcaacatgaaggtgccgctgaaggtcgacgcccgcgccgcgcagaactgg
gacgaggcgcattag
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