Sinorhizobium americanum: SAMCFNEI73_Ch0225
Help
Entry
SAMCFNEI73_Ch0225 CDS
T04621
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
same
Sinorhizobium americanum
Brite
KEGG Orthology (KO) [BR:
same00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
same03016
]
SAMCFNEI73_Ch0225 (truB)
Enzymes [BR:
same01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMCFNEI73_Ch0225 (truB)
Transfer RNA biogenesis [BR:
same03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMCFNEI73_Ch0225 (truB)
Prokaryotic type
SAMCFNEI73_Ch0225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
APG89559
UniProt:
A0A1L3LHI1
LinkDB
All DBs
Position
236798..237733
Genome browser
AA seq
311 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGDAVRSSSERPSEEAIRALLPKYTGVI
SQVPPQFSAIKIDGERAYDLARDGETVEIPAREVEVFRLSLIGSTPHLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVALADLVALEKIEDDAERLAALDDYL
IDTGEALSELPHVAVSDDQAHRLRMGNPIILRGRDAPLPAPEAYATARGKLVAIGEVAEG
EFRPKRVFASH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgcgcaaacccaagggccgtccgatttcgggctggctcatcctcgacaag
ccgctcgatttcggctccacggaggcggtctccaagatcaagtggctgttcaaggcgcag
aaggccggccatgccggcacgctcgatccgctggcctccggcatgctgccgatcgccctc
ggcgacgccacgaagaccgttccttacgtcatggacggccgcaagatctacgagttcacc
gtcgcctggggcgaggagcgctcgaccgacgacctggaaggggatgccgttcgctcgtct
tccgagcgcccgagcgaagaggcgatccgtgccctgctgccgaaatataccggcgtaatc
agccaggtgccgccgcagttttcggcgatcaagatcgacggcgagcgtgcctacgatctc
gcacgggacggcgaaaccgtggaaattcccgcgcgcgaggtggaggtcttccgtctctcg
ctgatcggctcgacgccgcatctcgcccatttcgagatcgaatgcggcaagggcacctat
gtccgttcgcttgcccgtgacatgggccgcgatctcggctgcttcggtcacatcgcctct
ttgcgccgcaccttcgtcgcccctttcggcgaggaggacatggtcgcgctcgccgatctc
gtggcgctggaaaagatcgaggacgacgcggaacgacttgccgcgctcgacgattatctg
atcgataccggcgaggcgctgtccgaactgccgcatgtggcggtgagcgacgatcaggcg
caccgcttgagaatgggcaacccgatcatcctgcgtggccgggacgccccgttgccggcc
ccggaggcctacgcaaccgcacgcggcaagctcgttgcaatcggtgaagtggccgaaggt
gaatttcgaccgaaacgtgtgttcgccagccattga
DBGET
integrated database retrieval system
