Sinorhizobium americanum: SAMCFNEI73_Ch1404
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Entry
SAMCFNEI73_Ch1404 CDS
T04621
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
same
Sinorhizobium americanum
Pathway
same03030
DNA replication
same03430
Mismatch repair
same03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
same00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMCFNEI73_Ch1404 (dnaE)
03430 Mismatch repair
SAMCFNEI73_Ch1404 (dnaE)
03440 Homologous recombination
SAMCFNEI73_Ch1404 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
same03032
]
SAMCFNEI73_Ch1404 (dnaE)
03400 DNA repair and recombination proteins [BR:
same03400
]
SAMCFNEI73_Ch1404 (dnaE)
Enzymes [BR:
same01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMCFNEI73_Ch1404 (dnaE)
DNA replication proteins [BR:
same03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMCFNEI73_Ch1404 (dnaE)
DNA repair and recombination proteins [BR:
same03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMCFNEI73_Ch1404 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
APG90710
UniProt:
A0A1L3LKT8
LinkDB
All DBs
Position
1425162..1428656
Genome browser
AA seq
1164 aa
AA seq
DB search
MAGDESIGQGIVAANPQFVHLRVHSAYSLLEGALPLKKIIAKAVADDQPAIGIADTNNLF
AALEFSQKAADEGLQPIIGCQLSIDMEDEAEGERRGHAQQLAKLPSIVLIAATDEGYVRL
VDLVSRAYLEGEGHQAARITRSWLAAGGTDGLIALTGAGSGPVDLALKSGSPASAEVRLK
AMMELFGNRLYVELQRHGSYDRRHESRLMELAYRYDLPLVATNEAFFPSPADYDAHDALM
AVAHNAVVSDDRRFRLTSDHYLKSRKEMAALFADLPEALESTVEIARRCSFMLKTRGPIL
PRFTGASDDPVEAERAESAELRRQAEEGLEERLGRLGMAPGYKEEDYRERLAFELGVIER
MKFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPMRFSLLFERFLNP
ERVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVLEMPYG
QVDKICKLVPNNPANPTPLSKAIEEEPRLKEEAEKEPVVGRLLDIAQKIEGLYRHASTHA
AGIVIGDRPLSQLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDFV
AKRGIAVDLASIPLDDPKTYEILSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVAL
YRPGPMENIPVYNARKHGEEEIESIHPKIDYLLKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIKEEMDKQRARFVDGAVKNSVSKPQADLIFDLLAKFANYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKINDFRQDAMRLGIQVIAPSVQSSFRPFE
TGDNRIYYSLAAIKGVGESAVDHIVAVRGNRPFASLEDFCLRIDPKLLNRRVFESLIAAG
AFDCFGYDRAELIGGLDRILGFAQRAQENKLSGQSDMFGAGAATGPEKIALPAYTPWLAS
EKLHREFQVLGFYLSAHPLDTYNNLLAKMRVQTFADFSAAVKKGATAGRLAGTVTSKQER
KTRTGNKMGIVAFSDASGQFEAVLFSEMLHQYRDLLEPGKSLVMTVDAEERPEGIGLRIR
TLRSLEEESLQMQKALRVYVRDSGPLRSIASHLNAKGDGLVSFIVIKDNGQREIEVELSE
KYRISPEIAAALRSAPGVVDVELV
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgacgaaagcatcgggcagggtatagtggccgcgaatccgcaattcgttcac
ctgcgcgtgcactcggcatactcgctgctcgaaggggcgttgccgctgaagaagatcatt
gccaaggcggtggccgacgatcagccggcgatcggcattgccgatacgaacaatctgttc
gcggcgctggagttttcccagaaggcggcggacgagggattgcaaccgatcatcggctgc
cagctgtccatcgatatggaggacgaggcggagggcgagcggcgcggccatgcgcagcag
ctcgccaagctgccctcgatcgtcctgatcgccgcgaccgacgaaggctacgtccgcctc
gttgacctggtcagccgcgcctatctcgaaggcgaaggtcatcaagcggcgcgcataacg
cggtcctggcttgccgccggtggtaccgatggattgatcgccttgaccggcgccggcagt
ggcccggtcgatctggcactgaaatcaggctcgccggcttctgccgaggtgcgtctcaaa
gcgatgatggagctgttcggcaatcgtctctatgtcgaattgcagcgccatggcagctac
gaccgacgccatgagagccgcctgatggagctcgcttatcgctacgatctaccgctcgtc
gcgacgaacgaggcctttttcccgtcgccggccgattatgacgcgcatgatgctttgatg
gccgttgcccacaatgccgtcgtttccgatgatcgccgcttcaggctgacgtcggatcac
tatctcaagagccgcaaggagatggcggcacttttcgccgatctgccggaagcgctggaa
agcacggtcgagatcgcgcgccgttgctccttcatgctgaagacccgcgggccgatcctg
ccgcgcttcaccggtgcctcggatgatcccgtcgaggccgagcgcgccgaatccgccgag
cttcgccgccaggcggaggaagggctggaggagcgtctggggaggcttggcatggcgccg
ggctacaaggaggaggactatcgcgagcggctcgccttcgaactcggcgtcatcgagcgg
atgaaatttccaggttacttcctgatcgttgccgacttcatcaaatgggcgaagcagcat
gacattcccgtcggtccgggccgcggctccggcgccggatcgctggttgcctatgcgctg
acgattaccgatgtcgatccgatgcgcttctcactgcttttcgagcgcttcctcaatccg
gagcgcgtgtcgatgccggacttcgacatcgacttctgccaggatcgccgcgaagaggtc
attcgctacgttcagcagaaatacggccgcgaacaggtggcgcagatcatcaccttcggt
tcgctgcaggcgcgtgcggcgttgcgcgacgtcggacgcgtgctcgaaatgccctacggc
caggtcgacaagatctgcaagctggtgccgaacaatccggcgaacccgacgccgctttcc
aaggcgatcgaggaggaaccgcgcctcaaggaggaggcggaaaaggagccggtcgtcggg
cgcctccttgacatcgcgcaaaagatcgaagggctttaccgccacgcctcgacgcacgcg
gcgggcatcgtcatcggtgaccggccgctgtcgcaactggtgccgatgtatcgcgatccg
cgctccgacatgccggtcacccagttcaacatgaaatgggtcgagcaggccgggctcgtg
aagttcgacttccttggcctgaagacgctgacggtgctgaagacggcggtcgacttcgtt
gccaagcgcggcatcgcagtcgatctggcgagcatcccgctcgacgatccgaaaacctac
gagattctttcccgcggcgagacggtcggggtgttccaggtggaaagcgccggaatgcgc
aaggcgctgatcggcatgcggccggactgcatagaagacatcatcgcgctggtggcgctc
taccggccgggtccgatggaaaacatcccggtctacaacgctcgcaagcatggggaggag
gagatcgaatcgatccacccgaagatcgactacctgctcaaggaaacgcaaggcgttatc
gtctaccaggaacaggtgatgcagatcgcccaggtgctgtcgggctattcgctcggcgag
gccgacctgttgcgccgcgccatgggcaagaagatcaaggaggagatggacaagcagcgc
gcccgcttcgtcgacggcgccgtcaagaatagcgtctccaaaccgcaggcggacctgatc
ttcgatctgctcgccaagttcgccaattacggcttcaacaagtcgcatgcggccgcctac
gccatcgtctcctaccagaccgcctacatgaaggcgcactatccggtcgagttcctggcg
gcgtcgatgacgctcgacatgtcgaacaccgagaagatcaacgacttccgccaggacgcg
atgcgcctcggcatccaggtgatcgcgccctcggtgcagagctcgttccgcccgttcgag
accggcgacaaccgcatctattactccctggccgccatcaagggtgtcggcgaatccgct
gtcgaccatatcgtcgccgttcgcggcaaccggcctttcgcaagcctcgaggatttctgc
cttaggatcgacccgaaactcctgaaccggcgcgtcttcgaaagcctgatcgccgccggt
gccttcgactgcttcggttatgaccgggccgagctcatcggcggcctcgaccggattctc
ggctttgcgcagcgcgcccaggaaaacaagctgagcggccagagcgacatgttcggcgcg
ggcgctgcgacgggtcccgaaaagatcgctctgccggcctacacgccctggcttgcctcg
gagaagctgcaccgcgagttccaggtgctcggcttttacctttccgcccatccgctcgat
acctacaacaatctcctggcgaagatgcgcgtgcagacattcgcggatttttccgccgcc
gtgaagaaaggggcgaccgcaggccggcttgccggcacggtgacgtcgaagcaggagcgc
aagacgcgcaccggcaacaagatgggcatcgtcgccttctccgatgcgtccggtcagttc
gaggcggtgctgttctcggaaatgctgcaccagtatcgcgatctgctggagcccggcaag
tcgctggtgatgaccgtcgatgcggaggagcggccggaaggcatcggccttcgcatccgg
acgctgcggtcgctcgaagaggaatccctgcagatgcagaaggcgctgcgcgtctatgtg
cgcgactccggccccttgcgctccatcgcctcgcatctcaacgccaagggcgacggtctc
gtctccttcattgtcatcaaggacaatggtcagcgggagatcgaggtcgagctcagtgag
aaataccggatctcgccggaaatcgctgcggcgcttcgctccgcgccgggtgtcgtggac
gtcgagttggtatag
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