Sinorhizobium americanum: SAMCFNEI73_Ch1418
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Entry
SAMCFNEI73_Ch1418 CDS
T04621
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
same
Sinorhizobium americanum
Brite
KEGG Orthology (KO) [BR:
same00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
same03032
]
SAMCFNEI73_Ch1418 (topA)
03400 DNA repair and recombination proteins [BR:
same03400
]
SAMCFNEI73_Ch1418 (topA)
Enzymes [BR:
same01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMCFNEI73_Ch1418 (topA)
DNA replication proteins [BR:
same03032
]
Prokaryotic type
DNA Topoisomerases
SAMCFNEI73_Ch1418 (topA)
DNA repair and recombination proteins [BR:
same03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMCFNEI73_Ch1418 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
APG90724
UniProt:
A0A1L3LKW6
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All DBs
Position
complement(1440521..1443166)
Genome browser
AA seq
881 aa
AA seq
DB search
MESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAKRMKDI
ADAVKSSDGLILATDPDREGEAISWHVLDLLKKKKVIGDKPVKRVVFNAITKKAVLDAMA
DPRDIDISLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDREAEIE
RFVTEEYWNISALLKTLRGDEFEARLVSADGKRLQAKSIGNGEEANRLKALLDGASYVVE
SVEAKPVKRNPGPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDVGGETVGLITYMR
TDGVQMAPEAIDAARRAIGSQFGPRYLPEKPRFYSTKAKNAQEAHEAIRPTDFNRTPDQV
RRFLDGDMLKLYDLIWKRGIASQMASAEIERTTAEILADNGGKKAGLRATGSVIRFDGFI
AAYIDMKEDGEQADDGDEDGRLPEINARESLAKQKINASQHFTEPPPRYSEATLIKKMEE
LGIGRPSTYAATISTLVDRDYVTIDKRKLLPQAKGRLVTAFLESFFTRYVEYDFTASLEE
KLDQISAGELNWKDVLREFWKDFFSQIEDTKELRVTNVLDALNEELAPLVFPNREDGGDP
RTCQVCGTGKLSLKLGKYGAFVGCSNYPECNYTRQLSSESNGEAEAAVSNEPQSLGKDPH
TGEEITLRSGRFGPYVQRGDGKDAKRASLPKGWTPATIDHEKALALLSLPRDIGKHPETG
KMISTGIGRYGPFVLHDGTYANLESVEDVFSIGLNRAVSALADKQSKAAGGGRGRAAAAL
KELGEHPDGGAITVRDGRFGPYVNWGKVNATLPRGKDPQSVSVEEALALIAERAAKGGVS
NGNATKGRSAAAATKSTATKTGKPKTAAKAKSKTAAKAKKD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtggagtcgccttccaaggccaagacgatcaacaagtatctcggcccaggctacaaggta
cttgcttcgttcggccatgtgcgggatctgccggccaaggatggatcggttcgcccggac
gaagacttcgaaatgtcgtgggaagtcgatggcgcctccgccaagcggatgaaggacatt
gccgacgccgtgaagtcgtcggatgggctgattctcgcgaccgaccccgatcgcgagggt
gaggcgatctcctggcacgtgctcgacctcctcaagaaaaaaaaggtcatcggcgacaag
cccgtcaagcgcgtcgtcttcaatgccatcaccaagaaggccgtgctcgatgccatggcg
gacccgcgcgacatcgacatctcgctggtcgacgcctatctcgcccgtcgcgcgctcgac
tacctggtcggcttcaacctttcgccggttctctggcgcaagctgccgggcgcgcgctcg
gccggccgcgtgcaatcggtggcgctgcgtctcgtctgcgatcgcgaggcggagatcgaa
cgcttcgtcacggaagaatactggaacatctcggcgctcttgaagacgctgcgcggcgac
gagttcgaagcgcggctcgtctcggccgacggcaagcggctgcaggcgaagtccatcggc
aacggtgaggaagccaatcggctgaaagcgctgctcgacggcgcgagctatgtggtcgag
agcgtcgaagcgaagccggtcaagcgcaatcccggtccgcccttcactacctcgacattg
cagcaggccgcttcttccaagctcggcttctcggcgtcgcgcaccatgcaggtggcgcaa
aagctctatgaaggcgtcgatgtcggcggcgagaccgtcggtctgatcacctatatgcgt
accgacggcgtacagatggcgccggaggcgatcgatgccgcgcgtcgggcgatcggcagc
cagttcgggcctcgctacctgccggaaaagccgcgcttctattccaccaaggcgaagaac
gctcaggaagcccacgaagccatccggccgaccgacttcaatcgcacacccgatcaggtc
cgccgcttcctcgacggcgatatgctgaagctctacgacctgatctggaagcgcggcatc
gccagccagatggcctcggcggagatcgagcgcaccacggcggaaatcctggcggacaac
ggcggcaagaaggccggcctcagggccaccggctccgtcatccgtttcgatggcttcatt
gccgcctatatcgacatgaaggaagacggcgagcaggcggacgacggcgacgaggacggc
cggctgcccgagatcaatgcgcgcgaaagcctcgccaagcagaagatcaacgccagccag
cacttcaccgaaccgccgccgcgctattcggaagcgacgctgatcaagaagatggaagaa
ctcggcatcgggcggccttctacctatgctgcgacgatcagcacgctcgtcgatcgcgac
tatgtgacgatcgacaagcgcaagctgttgccgcaggcgaagggccggcttgtcaccgcc
ttcctcgagagcttctttacccgctatgtcgagtacgatttcaccgcgtcgctcgaggaa
aagctcgaccagatttccgctggcgagctcaactggaaagacgtgctgcgcgagttctgg
aaggatttcttctcgcagatcgaggataccaaggaactgcgcgtcaccaatgtgctcgac
gcgctcaatgaggagctggcgccgctcgttttcccgaaccgcgaagacggcggcgacccg
cggacctgccaggtctgcggcaccggcaaactctcgctgaagctcggcaaatacggcgcc
ttcgtcggctgctccaattatccggagtgcaactacacgcgccagctttcgtcggaaagc
aatggcgaggcggaagcagccgtatcgaacgagccgcagagcctcggcaaggatccgcac
accggcgaggaaatcaccctgcgcagcggccgcttcggaccctatgtccagcggggcgac
ggcaaggacgccaagcgcgccagccttcccaagggctggacgccggcgacgatcgaccac
gagaaggcgctcgcccttctctcgctgccgcgcgacatcggcaagcatcccgaaaccggc
aagatgatctcgaccgggatcggccgctacggcccgtttgtgctgcatgacggcacctat
gccaacctcgaatcggtcgaggacgtcttctcgatcggcctcaatcgcgccgtctcggcc
ctcgcagacaagcagtcgaaggctgcagggggtggccgcgggcgcgccgccgccgcgctc
aaggaactcggggaacatcccgacggcggggcgattacggtgcgcgacgggcgcttcggc
ccctatgtcaactggggcaaggtgaacgccaccctgccgaggggcaaggatccgcaatcg
gtgagcgtcgaagaggcgctcgcactgatcgccgagcgcgcggcgaaaggcggcgtgtcg
aatggcaacgcgacgaagggccgatccgcggccgcggcaacgaagagcacggcgacgaaa
accggaaagcccaagaccgccgcaaaagcgaagagcaagacggccgcgaaggccaagaag
gactga
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