Sinorhizobium americanum: SAMCFNEI73_Ch2082
Help
Entry
SAMCFNEI73_Ch2082 CDS
T04621
Name
(GenBank) L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
same
Sinorhizobium americanum
Brite
KEGG Orthology (KO) [BR:
same00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
same01002
]
SAMCFNEI73_Ch2082
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
same01011
]
SAMCFNEI73_Ch2082
Peptidases and inhibitors [BR:
same01002
]
Cysteine peptidases
Family C82
SAMCFNEI73_Ch2082
Peptidoglycan biosynthesis and degradation proteins [BR:
same01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SAMCFNEI73_Ch2082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
APG91368
UniProt:
A0A1L3LMP6
LinkDB
All DBs
Position
complement(2076144..2078036)
Genome browser
AA seq
630 aa
AA seq
DB search
MKMIKSVAIVALMGGCAIATMDVRPASALTLMDFIRGGRKRTPEQAYPVQPGYDMMAPQR
LEDRTAVKPPKVSSPRYYNYKPEQMRRIATDRLVDPVVTGSVQSYGFPPMLRIPLADARK
LLPQVEVRAPAEVAKAVEAFYAGRTDFVWIGGEGVNGRARAALAVLDDAAKVGLDPKDYA
VTVPAGDFDPADMVAREKDLVQFEIAMSAAVLTYVEDTVRGRIDPNKISGYHDFKRKSVD
LVAFLDKAATSADIAALIEERNPKHPQFLALKQELERLRAETAAAPRVEIAPGTLLKPGD
NNPELANIIAGIKLKASEALKTEHAVVLAGYQGTPEYTPELVSLVEAFQKEQGLKADGVV
GQASIRVLTGGDTTASKINKLEIAMEQARWLPNDLGNRYVFINQPAFMAYYTDQGAEQFS
MRVVVGSKANQTYFFHDEIQTVEVNPYWGVPQSIIVNEMLPKLRSDPSYLDRMGYQVEVG
GQVVPSYAVDWYGSTNSIAVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDQRA
LSHGCVRLAEPRRMAAAVLGISMEDVGKEIAAGHNRALPVPQKVPVYVSYFTAWPNKDRK
VEYFNDVYERDMYMNRAFDATRKARQQAEG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaagtcggtagcgattgtggcgcttatgggcggctgtgcgattgcaacc
atggatgtgcgaccagcctcagctctcacgctgatggattttatccgcggcggcaggaag
cggacgcccgagcaggcctatccggttcagccgggctacgacatgatggcgccgcagcgc
ctcgaagacaggacagcggtaaagccgccaaaggtttccagtccgcgctactataactac
aagcccgagcagatgcgcaggattgcgactgatcgcctggtcgatccagtcgtgacgggc
tcggtgcagagctacggctttccgcccatgctgcggatcccgcttgccgatgcccgcaag
cttctgccgcaggtcgaggtgcgcgccccggccgaggtggcaaaggcggtcgaagccttt
tatgccggccggaccgatttcgtctggatcggaggcgagggcgtcaatgggcgggcccgt
gccgccctggcggtactcgacgatgctgccaaggttgggctcgacccgaaggactatgcc
gtcactgttccggccggtgacttcgacccagccgacatggtcgcgcgggaaaaagatttg
gtgcaattcgagatcgccatgtccgcggcggtcctcacctatgtcgaggacacggttcgg
gggcgcatcgacccgaacaaaatttccggctaccacgacttcaagcgcaagagcgtcgat
ctcgtcgccttcctcgacaaggccgccacgagcgctgacattgcagccctgatcgaagag
cgcaatccgaagcacccgcagttcctggcgttgaaacaggaactcgaaaggctgcgagcc
gaaacggccgccgctccgcgtgtcgagatcgcgccgggaacgctgctgaagccgggcgat
aacaatccggagcttgccaatatcatcgccgggatcaagctgaaggcttccgaagcgctg
aagaccgagcatgccgtggtgctggccggttatcaggggacgcctgagtacacgcccgaa
ctcgtttcccttgtcgaagccttccagaaggagcaggggttgaaggcggacggtgtcgtt
ggccaggcctcgatccgggtgctgaccggcggcgacacgaccgccagcaaaatcaacaag
ctcgagatcgcgatggagcaggcccgctggctgccgaacgatctcggcaatcgctacgtc
ttcatcaaccagcccgctttcatggcctattataccgaccagggcgcagagcaattctcg
atgcgcgtcgtggtcggctcgaaggcgaaccagacctatttcttccacgacgagatccag
accgtcgaggtcaatccctattggggcgtgccccagtcgatcatcgtcaacgagatgctg
ccgaagctgcgcagcgatccgagctatctcgaccgcatggggtatcaggtcgaagtcggc
ggccaggtcgtgccgtcctatgcggtcgactggtacggatcgacgaactcgattgccgtg
cgccaaccgccgagcagcgacaacgcccttggcgaattgaagatcctcttcccgaattcc
cacgcgatctacatgcacgacacgccgtcgaagagcttcttcaaacgcgaccagcgtgcg
ctgagccacggctgcgtccgcctcgccgagccgcgtcgtatggcagcggccgtcctcggc
atcagcatggaggatgtcggcaaggagatcgccgcgggccacaaccgggccctgccggtg
ccgcagaaggtgccggtctatgtttcctacttcacggcctggccgaacaaggaccgtaag
gtggagtatttcaatgacgtctacgagcgcgacatgtacatgaaccgcgccttcgacgcg
acccgtaaggcccggcagcaagccgagggctga
DBGET
integrated database retrieval system
