Sinorhizobium americanum: SAMCFNEI73_Ch2738
Help
Entry
SAMCFNEI73_Ch2738 CDS
T04621
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
same
Sinorhizobium americanum
Pathway
same03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
same00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMCFNEI73_Ch2738 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
same03019
]
SAMCFNEI73_Ch2738 (rhlE)
Enzymes [BR:
same01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAMCFNEI73_Ch2738 (rhlE)
Messenger RNA biogenesis [BR:
same03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAMCFNEI73_Ch2738 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
NAT10_TcmA_helicase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
APG92013
UniProt:
A0A1L3LPR1
LinkDB
All DBs
Position
2743677..2745212
Genome browser
AA seq
511 aa
AA seq
DB search
MSTFKDLGLSQQILATLSANGFEKPTPIQMQAIPLVLKGHDLIGLAQTGTGKTAAFGLPM
IEKLLADDRRADPRNIRALVLAPTRELVNQIATNLKLFVKKSPLKIGVVVGGVSINKQTE
QLARGVDILVATPGRLLDLVARKAVTLTQGRYLVLDEADQMLDLGFIHDLRKISKLVPKN
RQTLLFSATMPKQIAELAGEYLTDPLKVEVTPPGKAADKVEQYVHFVPGKDLKTTILKKS
LTDNPDGLSLVFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL
VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRD
IEKLMGIEIAVASGQAPADQARPSKGRGGRGNGQQRGNGGGQHRGNGGGQRRDGAQRPQR
PAREPAPSGFAGDELLRDDRPQKSERRDHRAAGHGHHDGRPEGNRNHENRKHHGRPGPKH
DGRRQGDGQPGNRRGRGQGMRRADNGGGSQG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgtccactttcaaagacctcggcctctcgcagcagatcctggcgaccctctccgccaat
ggcttcgagaagccgacgcccatccagatgcaggccatcccacttgtcctcaagggtcat
gaccttattggtcttgcccagacgggcaccggcaagacggccgccttcggcctgccgatg
atcgagaagcttctcgccgatgatcggcgcgccgatccgcgcaacatccgcgccctcgtg
cttgcgccgacccgcgaactggtcaaccagatcgccaccaatctcaagctcttcgtcaag
aagagcccgctgaagatcggcgtcgttgtcggcggcgtctcgatcaataagcagaccgaa
caactcgcccgcggcgtcgacattctcgtcgccacacccggccgcctgctcgacctcgtc
gcccgcaaggccgtgacgctgacgcaagggcgctatctcgtcctcgacgaggccgatcag
atgctcgacctcggcttcatccacgatctgcgcaagatctcgaagctggtgccgaagaac
cgccagacgctgctcttctccgcgaccatgccgaagcagattgccgagcttgccggcgag
tatctgaccgatccgctcaaggtcgaggtgacgccgcccggcaaggccgccgacaaggtt
gagcaatatgtccattttgtccccggcaaagacctgaagacgacgatcctcaagaaatcg
ctgaccgacaatcccgatgggctgtcactggtcttcagccgtacgaagcacggcgccgag
aagctgatgaagcatctggaccatgtcggcttcaaggccgcctcaatccacggcaacaag
agccagggccagcgcgagcgcgcgctgaaggcgttccgcgacggcgaaatccgcgtgctc
gtcgcgaccgacgtcgccgcccgcggcatcgacattccgggcgtgacccatgtctacaac
tacgatcttccggaagtgccggatgcctatgtccaccgcattggccgcaccgctcggaac
ggccgagacggtattgcgatcgctttctgcgcaccggacgaaatccgcctgctgcgcgac
atcgagaagctgatgggcattgaaatcgctgtcgctagcggccaagcaccggccgatcag
gcccgcccatcaaagggccgcggcggtcgcggcaacggccagcagcgcggcaacggcggt
ggccaacatcgcggcaacggcggcggccagcgccgcgacggagctcagcggccgcagcgc
cctgcacgggaaccggcgccgagcggatttgccggcgacgaactgctgcgcgacgatcgc
ccgcagaagagcgagcgccgcgatcaccgggccgccggccatggccaccacgacggccgg
ccggagggcaaccgcaatcacgaaaaccgcaagcaccatggccgcccgggcccgaagcat
gacggccggcgccagggcgacgggcagcccggcaatcgccgcgggcgtggtcaaggcatg
cgccgcgcagacaatggcggcggcagccagggctga
DBGET
integrated database retrieval system
