Sinorhizobium americanum: SAMCFNEI73_Ch3417
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Entry
SAMCFNEI73_Ch3417 CDS
T04621
Name
(GenBank) DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
same
Sinorhizobium americanum
Brite
KEGG Orthology (KO) [BR:
same00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
same03032
]
SAMCFNEI73_Ch3417
03400 DNA repair and recombination proteins [BR:
same03400
]
SAMCFNEI73_Ch3417
Enzymes [BR:
same01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMCFNEI73_Ch3417
DNA replication proteins [BR:
same03032
]
Prokaryotic type
DNA Topoisomerases
SAMCFNEI73_Ch3417
DNA repair and recombination proteins [BR:
same03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMCFNEI73_Ch3417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
APG92671
UniProt:
A0A1L3LRF3
LinkDB
All DBs
Position
3443688..3444860
Genome browser
AA seq
390 aa
AA seq
DB search
MPLQVTSNPARQGAPVRPGGGRSRNGRAPAVGEIPPKESGLVYVSDSEPGIRRQRAGKGF
LYRLPDGSILTDPAVKARIASLGLPPAYDKVWICLDEDGHLQATGYDARGRKQYRYHTEW
QALRSGDKFAQLLLFGKALPRIRRTVRRHMEGGTGDARTVLAALVALLDEVHLRTGSPAY
VQANSTYGATTLLKRHLRLLDGSIELRFTAKGGKRVQRRLRRPKLQRLLEDIADLPGRQL
FVWRDDNDILRPVDSGRLNRYLAEVAGFPVSAKTFRTWAGSVAAFTAAREAMEQGKRPTV
REMCEAAAEILCNTPAICRKSYIHPDIIALADAASAASAAKLSRRGRANPELRVEEARML
HFLARAARAEPKAKASMNGVAAGLQRRTSS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcaagtcacttccaatccggcccgccagggggcgcccgtgcggcccggcggc
gggcgcagccgcaatgggcgcgctccggccgtaggcgagatcccgccgaaggaaagcggg
ctcgtctatgtcagcgattcggagcctggcatcaggcgccagcgcgccggcaagggtttc
ctctaccggctaccggacggctcgatcctgaccgatcctgccgtgaaggctcggatcgcg
tcgctgggcctgccgcccgcctatgacaaggtgtggatctgcctggacgaggacggtcac
ctgcaggcgaccggctatgacgcacgcggccgaaagcaataccggtaccacacggaatgg
caggcgctgcgaagcggcgacaaattcgcccagctccttctgttcgggaaggcgctaccg
aggatccggcgcacggtccgccggcacatggaaggcggaaccggcgacgcacgcacggtg
ctcgctgctctggtcgcgctcctcgatgaagtgcatctcaggacgggaagtcccgcctat
gtccaggcgaattcgacctatggcgcgacgacgcttctgaaacgccatctgcggctcctc
gacggcagcatcgaactgcgctttaccgccaagggcggcaaaagggtgcagaggcggctg
cggcgcccgaaactgcaacgcctgctcgaggacatcgccgacctgccaggacggcagctc
ttcgtgtggagggacgacaacgacatcctgcgccccgtcgactccggccgtctcaatcgc
tatctggcggaggtggccggctttcctgtttcggccaagacgttccggacctgggcgggc
agcgttgccgccttcacggcggcgcgcgaggcgatggagcagggcaagcgcccgacggtc
agggagatgtgcgaggcggcggccgagatcctctgcaacacgccggcaatctgccgcaag
agctacatccacccggacatcattgcgctcgccgacgctgccagtgcagcctccgccgcc
aagctcagccgccgcgggcgggcaaacccggaactccgggtcgaggaagcgcgcatgctt
catttccttgcgcgcgccgcacgcgcggagccgaaggctaaggcttccatgaacggagtg
gcggcgggcctacagcgccgcacgtctagttag
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