Sinorhizobium americanum: SAMCFNEI73_Ch3620
Help
Entry
SAMCFNEI73_Ch3620 CDS
T04621
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
same
Sinorhizobium americanum
Pathway
same00300
Lysine biosynthesis
same00470
D-Amino acid metabolism
same01100
Metabolic pathways
same01110
Biosynthesis of secondary metabolites
same01120
Microbial metabolism in diverse environments
same01230
Biosynthesis of amino acids
Module
same_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
same00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAMCFNEI73_Ch3620 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMCFNEI73_Ch3620 (dapF)
Enzymes [BR:
same01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SAMCFNEI73_Ch3620 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
APG92870
UniProt:
A0A1L3LS05
LinkDB
All DBs
Position
complement(3635107..3636024)
Genome browser
AA seq
305 aa
AA seq
DB search
MDNRDMADQVQFARMNGLGNKILVVDMRGRKDRVTPAAAIALNADPATEFDQIMAIHDPK
AAGTDAWIDIVNSDGSMAQACGNGTRCVVQALAAETGKKAFMFHTVAGLLEAKEHDGGLI
SVDMGSPRFGWNEIPLAEEFHDTRRIELQIGPIDDPVLHSPSVASMGNPHAIFWVKNDVW
SYELERFGPLLENHPIFPERANISIARVRSREEMDLRTWERGAGLTLACGSAACAAAASG
ARTGRTDRTVTVNVPGGPLKIEWRERDDHVLMTGPAEWEWSGRLDPATGAFERDAASGAN
GARAL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggacaatcgcgacatggccgatcaggtgcaatttgccaggatgaacgggcttggaaac
aagatcctggtcgtcgacatgcgcggccgcaaggatcgcgtcacgcctgcggcggcgatc
gctctcaatgccgatccggcgaccgaattcgaccagatcatggcgatccacgatcccaag
gccgccggcacggatgcctggatcgacatcgtcaattccgacggctcgatggcgcaggcc
tgcggaaacggtacccgctgcgtcgtccaggcgctcgccgccgagaccggcaaaaaggcg
ttcatgttccatacggtcgccggcctgctcgaggccaaggaacatgacggcggcttgatc
tcggttgacatgggaagcccgcgcttcggctggaacgagatcccgctcgccgaggaattc
cacgatacgcgccgaatcgagctgcagatcgggccgatcgacgatccggtgctgcattcg
ccgtcggtcgcctcgatgggcaatccgcatgcgatcttctgggtgaagaacgacgtttgg
agctacgagctcgagcgcttcggcccgctgctcgaaaaccacccgatctttcccgaacgc
gccaatatctcgatcgcccgtgtccgttcgcgtgaggagatggacctgaggacctgggag
cgcggcgccgggcttacgcttgcctgcggctccgccgcctgtgccgccgccgccagcggc
gccagaaccggccgcacggatcggaccgtgacagtgaacgttccgggcgggccgcttaag
atcgaatggcgcgagcgcgacgaccacgtgctcatgacggggccggccgaatgggaatgg
tcgggcaggctcgatcccgccaccggtgctttcgagcgtgatgcggcgagcggcgcaaac
ggagcgcgagcgctttga
DBGET
integrated database retrieval system