KEGG   Sinorhizobium americanum: SAMCFNEI73_Ch3726
Entry
SAMCFNEI73_Ch3726 CDS       T04621                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
same  Sinorhizobium americanum
Pathway
same03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:same00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAMCFNEI73_Ch3726 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:same03021]
    SAMCFNEI73_Ch3726 (rho)
   03019 Messenger RNA biogenesis [BR:same03019]
    SAMCFNEI73_Ch3726 (rho)
Transcription machinery [BR:same03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     SAMCFNEI73_Ch3726 (rho)
Messenger RNA biogenesis [BR:same03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SAMCFNEI73_Ch3726 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 NACHT DUF6360 AAA Fungal_virus_P2_C DUF8346
Other DBs
NCBI-ProteinID: APG92975
UniProt: A0A1L3LSB6
LinkDB
Position
complement(3761690..3762955)
AA seq 421 aa
MAEMKLQDLKNKTPTDLLAFAEELEVENASTMRKQELMFAILKNLATQEIEIIGEGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFDDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSARVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAT
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctgaaatgaagcttcaagacctcaagaacaagacgccgacggatctcctcgccttt
gccgaagagctcgaggtcgagaacgccagcactatgcgtaagcaagagctgatgttcgcc
atcctcaaaaatttggccacgcaagagatagaaatcatcggtgaaggtgttgtcgaggtc
cttcaggacggcttcggctttcttcggtcggcaaatgcaaattacctgcccggtccggat
gacatctacatttcgccgtcgcagatccgccgcttctcgttgaagacgggcgacacggtc
gagggaccgatccgcggaccaaaggaaggcgagcgctacttcgcgctgctcaaggtcaat
acgatcaatttcgacgacccggagaagatccgccataaggtccacttcgacaacctgacg
ccgctctatccgaatgagcgcttcaagatggaactcgaagttccgacctccaaggacctg
tccgcccgggttattgacctggtagcgccgctcggcaagggtcagcgcggcctgatcgtc
gccccgccgcgtaccggtaagacggttctcctgcagaacatcgcccactcgatcaccgcc
aaccacccggaatgctatctgatcgtcctcttaatcgacgagcggcccgaagaagtgacc
gacatgcagcgttcggtgaagggcgaagtcgtctcctcgaccttcgacgaaccggcgacg
cggcacgtgcaggtggccgagatggttatcgaaaaggccaagcgcctcgttgagcacggc
cgcgatgtggtcattctgctcgattcgatcacgcgcctcggacgtgcctacaacaccgtc
gttccgtcatccggcaaggtgctgaccggcggtgtcgacgccaacgcactgcagcggccg
aagcgcttcttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcgca
acggcactgatcgacaccggcagccgtatggacgaagtcatcttcgaagaattcaagggc
accggcaactcggaaatcgtgctcgaccgcaaggtcgccgacaagcgcatcttcccggcc
atggatatcctgaagtccggcacgcgcaaggaagacctgctggtgccgcgtcaggacctg
cagaagatcttcgtgctgcgccgtatcctggcgccgatgggcacgaccgacgcgatcgaa
ttcctgattgacaagctcaagcagacgaagaccaacggcgacttcttcgattcgatgaac
acctga

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