Staphylococcus aureus MS4: NI36_08795
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Entry
NI36_08795 CDS
T04800
Name
(GenBank) single-stranded-DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sams
Staphylococcus aureus MS4
Pathway
sams03410
Base excision repair
sams03430
Mismatch repair
sams03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NI36_08795
03430 Mismatch repair
NI36_08795
03440 Homologous recombination
NI36_08795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sams03400
]
NI36_08795
DNA repair and recombination proteins [BR:
sams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NI36_08795
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NI36_08795
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NI36_08795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALQ99962
LinkDB
All DBs
Position
complement(1763476..1765749)
Genome browser
AA seq
757 aa
AA seq
DB search
MIKPKYKWKLNKPTEYISDELTSKLKLTPIVKKILESKSIIDEQAIESIISDTDINHDSL
QLSDMTKTIERIKRAIANDEKILVYGDYDADGVTSTTILVTTLQLLGAQVGWHIPNRFTE
GYGPNELAFRNAHDEGITLIITVDNGIQGHNEIKMVQDLGVDVIVTDHHEIGSTLPEAYA
IVHPMHPSFNYPFQQLCGAGVAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLV
KQGLKVLNDQCPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTD
DEEEAAFLAEQVEHFNRERKDIVATITEEAMAMAEMKVKNGDLFLLLAKENWHEGVLGIV
ALKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEILSAHQELIAKFGGHHMAAGMT
MDIDNIESLAEGLNKWMKELSKTTSLDPVKPVDVLLTENDITIKNIRDMNRLRPFGTDFS
RPIFEMDDLSVSSVKAIGQQKNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQ
INEWNGNQSPQLIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEIKQQTDKVVLRDLPTSMEDLSNSLQQLQFSQLYIVLQHNHSIYFDGIPNMDVFKKC
YKALITKQETNIQKEGMLLCQHLSVKPDTLKFMLKVFLDLNFVTQEDGLIRINQQPDKRS
IDSSKVYQLRQQRMDVEKQLLYQDFSEIKNWIKSQLS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaccgaagtataagtggaaattaaataaaccaactgaatacataagtgatgaa
ttaacatcaaaattaaagttaacgccaatcgtaaaaaaaatattagaaagtaaatcgatt
attgatgaacaagcaattgaatccatcatttcagatacagatatcaatcatgattcactg
caattgagcgatatgactaagactattgaaagaattaaaagagcaatagcgaatgatgag
aaaatcctagtttatggtgattacgatgccgacggtgttacctcaactacaattttagtg
acaacattacaacttttaggtgcacaagtaggatggcatattcctaaccgctttaccgaa
ggatatggaccaaacgaactagcatttagaaatgctcatgatgaaggcataacattaatc
ataactgttgataatggcatacaaggtcataatgaaattaagatggttcaagatttagga
gttgatgtcattgtaactgatcatcatgaaattggtagtacattaccagaagcatatgca
atcgtacatccaatgcatccatcgtttaattatccgttccaacaattgtgtggtgcaggt
gttgcgtacaaattagcacaagcattgattgaaaatgtacctgattattttaaagcatta
gttgcgataggtaccattgcggatttagtatccttaactgatgaaaatcgatcattagtg
aaacaaggattaaaagtcttaaatgatcaatgtccgacctctgttaaagcattgctaaaa
gaagcgggatacaatgacaatattgatgaagaaacaattggttttattattggacctaga
cttaatgctgtaggtcgtttagatgacgcatcattagcttgcgaattgttgatgactgac
gacgaagaagaagctgcatttttagcagaacaagttgaacattttaaccgtgaaagaaaa
gatattgtagcaactatcacagaagaagcaatggcaatggcagaaatgaaagttaaaaat
ggagatttatttttacttttagcaaaagaaaattggcatgaaggtgtcttaggtattgtt
gctttgaaaattgtcgaaacatttgctttgccaacattaattttaaatattgatagggag
caaaatcatgcaaaaggttccgccagatcaattgatcaagtgtcgatgtttgaaatacta
tcagcacaccaagagttaatcgctaaatttggcggccatcatatggcagcaggtatgacg
atggatattgataatatagaatcgttagctgaaggtttaaataaatggatgaaagaatta
tctaaaacaacttcgttagatcccgtaaagccggtagatgtattattaacagaaaatgat
ataacgattaaaaatattcgtgatatgaatcgtttaagacccttcggaacagatttttct
agacctatttttgaaatggatgatttatcagtttcttcagttaaggcgataggtcaacaa
aaaaatcatctaaaattgacgcttggtgaaagtaatatcgccgcactattttggcaaaat
ggacacttagaacctgagttgcaagatgaacagccaattaatatattaggatctgttcaa
atcaacgaatggaatggtaatcaatcaccgcaattaattattcaagatattgcgatgaat
gaacagcaaatattagattatagaagtaaacgaaaaagtttaccttttacagaaaatgat
gaaaatattgtcgtgcttattcatcctaaaagtgataaagtaaatgcgaatgaatattat
tatggtgaagaaattaaacaacaaactgataaagtagtattaagagatttacctacgtcg
atggaagatttgtctaattccctgcaacaactgcaattttctcaactttatatagttttg
caacataatcattcgatttacttcgatggtatacctaatatggatgtttttaaaaagtgt
tataaagcattaataactaaacaagaaacaaatatccagaaagagggtatgttattgtgt
caacatttaagtgtgaaaccagatacacttaaattcatgttgaaagttttcttagactta
aattttgtaacacaagaagatggtttaattcgaatcaatcaacaacctgataaaagatcg
attgattccagcaaagtgtatcaattaagacaacaacgtatggatgttgaaaagcaatta
ttatatcaagatttttcagaaataaaaaattggataaagtcacaattgtcgtga
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