Sandaracinus amylolyticus: DB32_002602
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Entry
DB32_002602 CDS
T03935
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
samy
Sandaracinus amylolyticus
Pathway
samy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DB32_002602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
samy03019
]
DB32_002602
03016 Transfer RNA biogenesis [BR:
samy03016
]
DB32_002602
Enzymes [BR:
samy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DB32_002602
Messenger RNA biogenesis [BR:
samy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DB32_002602
Transfer RNA biogenesis [BR:
samy03016
]
Prokaryotic type
tRNA degradation factors
DB32_002602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AKF05453
UniProt:
A0A0F6YH46
LinkDB
All DBs
Position
3031337..3033652
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AA seq
771 aa
AA seq
DB search
MTVCGTTEPRPGIDFLPLSVEYVEKTFAAGKIPGGFFKREGRLRDAEILVSRLIDRPCRP
LFPEGYRNEVQVIATVLSFDQENPTDVLAMLGASAALHISSIPWAGPIGGLRVGRVDGKW
VANPTYAEQERSDCELVVAASKDAIVMVEGEADEMSESDLVEALWFGKNAIQPAIQLVEQ
MREAVGTPKWSFTPPAKTPGLAERVAQVASEGVKKAINTPVKHQRYDLFKKVKKDIVAAL
LPELGAEKEKEIKEAYEDLKYVSMREQVLTDKRRVDGRDFTTVRPISIEMGLLPRVHGST
LFTRGETQGIVTATLGTTSDEQRIDALEGNTWKRFLLHYNFPAYSVGEVKPMRGPGRREI
GHGNLAERSLAKMVPGKEEFPYTIRIVSEITESNGSSSMATVCGGTLSLMDAGVPIKAPV
AGVAMGLIAEGDRYAVLTDILGDEDHLGDMDFKVCGTKRGVTGIQMDIKIAGLSRAIMEQ
ALAQAKDARLHILDKMLEAMPAARPELSKYAPRITTIKVKPDQIRLVIGPGGKTIKGIVE
ATGAQVDIEDDGTVHVASADPKAAEKALEMIRGLTTEPEVGKTYKGIVKRVEPYGAFLEI
MPGTDGLCHISDFAWERVEKTEDIMNLGDEIEVQVTDIDQTGRVRLSRKALLPKPEGWVE
RPAREPRESRGGDRDRDRGGRDRDRGGRDRDRGPRDRDRGPRDRDRDRPRDDRPRDDRPR
DDRPRDDRPRDDRPRDDRPREDRPRDDRPREDRPREDRPRDDRPRDDRDSD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtctgcggcaccaccgagccgcgccccggcatcgacttcctcccgctcagcgtc
gagtacgtcgagaagacgttcgccgcgggcaagatcccgggcggcttcttcaagcgcgag
ggtcgcctgcgcgacgccgagatcctcgtctcgcgcctgatcgatcgtccctgccgtccg
ctcttccccgagggctatcgcaacgaggtgcaggtcatcgcgaccgtgctctcgttcgat
caggagaacccgaccgacgtgctcgcgatgctcggcgcgagcgccgcgctgcacatctcg
tcgatcccgtgggcgggcccgatcggcgggctgcgcgtcgggcgcgtcgacggcaagtgg
gtcgcgaacccgacctacgccgagcaggagcgcagcgactgcgagctcgtcgtcgcggcc
agcaaggacgcgatcgtgatggtcgagggcgaggccgacgagatgagcgagagcgatctc
gtcgaggcgctctggttcggcaagaacgcgatccagcccgcgatccagctcgtcgagcag
atgcgcgaggcggtcggcacgccgaagtggtcgttcaccccgcccgcgaagacgccgggc
ctcgccgagcgcgtcgcgcaggtcgcgagcgagggcgtgaagaaggcgatcaacacgccg
gtcaagcaccagcgctacgacctcttcaagaaggtgaagaaggacatcgtggcggcgctc
cttcccgagctcggcgccgagaaggagaaggagatcaaggaggcgtacgaggatctgaag
tacgtctcgatgcgcgagcaggtcctcacggacaagcgccgcgtcgacgggcgtgacttc
acgaccgtgcgtccgatctcgatcgagatgggcctgctcccgcgcgtgcacggctcgacg
ctgttcacgcgtggtgagacgcagggcatcgtcaccgcgacgctcggcaccacgagcgac
gagcagcgcatcgacgcgctcgagggcaacacctggaagcgcttcctgctgcactacaac
ttcccggcgtactccgtcggtgaggtgaagccgatgcgcggccccggtcgccgcgagatc
ggccacggcaacctcgccgagcgctcgctcgcgaagatggtcccgggcaaggaagagttc
ccctacacgatccgcatcgtcagcgagatcaccgagtcgaacggctcgagctcgatggcg
acggtgtgcggcgggacgctctcgctgatggacgcgggcgtgccgatcaaggcgccggtc
gcgggcgtcgcgatgggcctgatcgccgagggcgatcgctacgcggtgctcacggacatc
ctcggtgacgaggaccacctcggcgacatggacttcaaggtctgtggcaccaagcgcggc
gtcaccggcatccagatggacatcaagatcgccggcctgagccgcgcgatcatggagcag
gcgctcgcgcaggcgaaggacgcgcggcttcacatcctcgacaagatgctcgaggcgatg
cccgcggcgcgcccggagctcagcaagtacgcgccgcgcatcacgacgatcaaggtcaag
cccgaccagatccgcctcgtgatcggccccggcggcaagacgatcaagggcatcgtcgag
gcgacgggcgcgcaggtcgacatcgaggacgacggcacggtgcacgtggcgtcggcggat
ccgaaggcggccgagaaggcgctcgagatgatccgcggcctgaccaccgagcccgaggtc
ggcaagacctacaagggcatcgtgaagcgcgtggagccctacggcgcgttcctcgagatc
atgccgggcaccgacggcctctgtcacatctcggacttcgcgtgggagcgcgtcgagaag
accgaggacatcatgaacctcggcgacgagatcgaggtgcaggtcaccgacatcgatcag
acgggccgcgtgcgcctgtcgcgcaaggcgctgctgccgaagcccgagggctgggtggag
cgtccggcgcgcgagccccgcgagagccgcggtggtgatcgcgatcgtgatcgcggcggc
cgcgatcgtgatcgcggtgggcgtgatcgggatcgtggcccgcgcgatcgcgaccgtggc
ccgcgtgatcgcgatcgtgatcgcccgcgtgatgatcgcccgcgcgacgatcgcccgcgc
gatgatcgtccgcgcgacgatcgcccgcgcgacgatcgcccgcgcgacgatcgtccgcgc
gaggatcgcccgcgcgacgaccgcccgcgtgaggatcgcccccgcgaggatcgtccgcgc
gacgaccgcccgcgcgacgaccgcgacagcgactga
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