Sandaracinus amylolyticus: DB32_002845
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Entry
DB32_002845 CDS
T03935
Name
(GenBank) Putative SigmaB asociated two-component system sensor protein
Organism
samy
Sandaracinus amylolyticus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Laminin_II
DUF948
OmpH
Motif
Other DBs
NCBI-ProteinID:
AKF05696
UniProt:
A0A0F6W2M6
LinkDB
All DBs
Position
3298032..3303692
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AA seq
1886 aa
AA seq
DB search
MGSRESADGSEKRTKRKPAKAVKSRTAAHEANGSINGHTAARAAANGRDDGKGRAAAASR
DLPARAPTSAKTAASRSRQGRYELPGADTMYNAVGSAVPVTEWDRLSALSRAEVDHLVDV
LKALKQGDFTVRFEYEKTGILGRAGELLNDIIGLNEHMTTELVRISRVVGQEGKMHERAS
VGPAKGSWAAGMTSVNQLIGDLVAPTNEVARVITAVARGDLSQKMVLEIDGRPVRGEFLR
IGTTVNSMVDQLNSFAAEVTRVAKEVGNEGKLGGQADVKGVSGTWKDLTDNVNGLAANLT
AQVRNIAKVTTAVAKGDLSQKITVDAKGEILELKNTINVMVDQLSSFASEVSRVAKEVGT
EGKLGGQAEVKGVSGTWKDLTDNVNGLAANLTAQVRSIAKVTTAVANGDLSQKITVDARG
EIYELKNTINTMVDTLRSFSAEVTRVAKEVGSEGKLGGQADVKGVYGTWKDLTDNVNAMA
SNLTVQLRDVSKVATAIANGDLTQKITVDVKGEILQIKDVINRMVDQLNSFAAEVTRVAK
EVGDEGKLGGQAEVRGVSGTWKDLTDNVNGLAANLTAQVRNIAKVTTAVANGDLTQKITV
DAKGEILELKNTINVMVDQLSSFAAEVTRVAKEVGTEGKLGGQANVKGVSGTWKDLTDNV
NGLASNLTVQLRDVSRVATAIANGDLTQKVTVDVKGEILQIKDVINKMVDQLNSFAAEVT
RVAKEVGTEGKLGGQAEVRGVRGTWKDLTDNVNVLAANLTTQVRNIANVTTAVANGDLSQ
KITVDARGEILELKNTINVMVDTLRSFSAEVTRVAKEVGTEGKLGGQADVKGVSGTWKDL
TDNVNVLAANLTTQVRNIAKVTTAVAKGDLSQKITVDAKGEILELKNTINTMVDTLNSFS
AEVTRVAKEVGTEGKLGGQADVKGVYGTWKDLTDNVNAMASNLTVQLRDVSKVATAIANG
DLTQKITVDVKGEILQIKDVINKMVDQLNSFAAEVTRVAKEVGTEGKLGGQADVKGVYGT
WKDLTDNVNAMASNLTVQLRDVSKVATAIANGDLTQKITVDVKGEILQIKDVINKMVDQL
NSFAAEVTRVAKEVGTEGKLGGQAEVRGVSGVWKDLTDNVNHMAANLTKQVRGIVKVVTA
VANGDLSQKFVLEAKGEVAALAETINNMTDTLRIFADQVTTVAREVGIEGKLGGQAKVPG
AAGTWRDLTDNVNQLAGNLTSQVRAIAEVSTAVAKGDLSRSITVEAQGELAALKDTINQM
IGNLKDTTDKNQEQDWLKTNLARFSGMMQGQRNIVSVAQLIMSELTPLVDAQHGAFYLME
EEEPREPLLHLIASYGFGGRKSLANKYKLRESLIGQCAFEKKRVLLGDVPEGFIYIATGM
GEAPPRSVVVLPVLFEGETKAVIELASFKTFSANHLTFLDQLMDSIGVILNMISSSMRTE
ELLQQLKKSNAELEAQAAELNDKAKLLEVKNNEVELASRSLEEKAEQLQLISKYKSEFLA
NMSHELRTPLNSLLILSKMLADNVQGNLTPEQVKFAQTVYTSGNDLLSLINEILDLSKVE
AGKMPIDPRIAPTDEVRDYLEQTFRHVAQQKSLSFDIRMEQGVPPELYTDISRLQQILKN
LLSNAFKFTAQGGVTLTIGRAPKDRGENVVSFAVTDTGIGIAHDKQKLIFEAFQQADGTT
SRKYGGTGLGLTISREIARLLGGTIEVKSEIDHGSTFTLYIPASYAGAESVRALEDGPSV
VDGTVMMLPEDASFAGTKVLLVDDDVRNLFALRTILEARNIHVLHAENGRIALEMLQTHP
DVDLVLMDTMMPEMDGLSATRAIRDILQFQTLPIVSLTAKAMKGDREKAIEAGATDYVTK
PVDPDNLLAVVHRWLPKRRSAASVPS
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggggagccgcgagagcgccgacgggagcgagaagcgcaccaagcgcaagcccgcgaag
gcggtgaagagccgtaccgccgcgcacgaggccaacggcagcatcaacggccacacggcc
gcgcgcgcggccgcgaacgggcgtgacgatggcaagggccgcgccgcggcggcgtcgcgc
gatctgccggcacgtgctccgacgtcggcgaagacggccgcatcgcgctcgcgacagggc
cgctacgagctcccgggcgccgacacgatgtacaacgccgtcggcagcgcggtgccggtg
acggagtgggatcgcctgtcggcgctgagccgcgccgaggtcgatcacctcgtcgacgtc
ctcaaggcgctcaagcagggcgacttcaccgtccgcttcgagtacgagaagaccggcatc
ctcggacgcgccggcgagctgctcaacgacatcatcggcctgaacgagcacatgacgacg
gagctggtgcgcatcagccgcgtcgtcggtcaggaaggcaagatgcacgagcgcgcgtcg
gtcggaccggcgaagggctcgtgggcggccggcatgacgtcggtcaaccagctgatcggc
gatctcgtcgcgccgacgaacgaggtcgcgcgcgtcatcacggcggtcgcgcgcggagac
ctctcgcagaagatggtcctcgagatcgacggccgtccggtgcgcggtgagttcctccgc
atcggcacgaccgtcaacagcatggtcgatcagctgaactccttcgccgccgaggtcacg
cgcgtcgcgaaggaagtcggcaacgaaggcaagctgggcggtcaggcggacgtcaagggc
gtcagcggcacctggaaggacctgaccgacaacgtcaacggcctcgccgcgaacctgacc
gcgcaggtccgaaacatcgcgaaggtcacgacggccgtcgcgaagggcgacctctcgcag
aagatcaccgtcgacgcgaagggcgagatcctcgagctgaagaacaccatcaacgtgatg
gtcgatcagctctcgtcgttcgcctccgaggtgtcgcgcgtcgcgaaggaagtcggtacc
gagggcaagctgggcggtcaggccgaggtcaagggcgtcagcggcacctggaaggatctg
accgacaacgtcaacggcctcgccgcgaacctgaccgcgcaggtgcgctcgatcgcgaag
gtcacgaccgcagtcgcgaacggggatctctcgcagaagatcaccgtcgacgcgcgcggc
gagatctacgagctgaagaacaccatcaacacgatggtcgacacgctccgctcgttctcg
gccgaggtcacgcgcgtcgcgaaggaggtcggctccgagggcaagctgggtggccaggcg
gacgtcaagggcgtctacggcacctggaaggacctcaccgacaacgtcaacgcgatggcg
tccaacctgaccgtgcagctgcgcgacgtcagcaaggtcgcgactgcgatcgcgaatggc
gacctgactcagaagatcaccgtcgacgtgaagggtgagattctgcagatcaaggacgtc
atcaatcggatggtcgatcagctgaactccttcgctgcggaagtgacccgcgtcgcgaag
gaagtcggcgacgaaggaaagctcggtggtcaggccgaggtgcgcggcgtcagcggcacc
tggaaggacctgaccgacaacgtcaatggcctcgcggcgaacctgactgcccaggtccgc
aacatcgcgaaggtgacgacggccgtcgcgaatggcgatctgactcagaagatcaccgtc
gacgcgaagggcgagatcctcgagctgaagaacaccatcaacgtgatggtcgatcagctc
tcgtcgttcgccgccgaggtcacgcgcgtcgcgaaggaagtcggcaccgagggcaagctc
ggcggtcaggcgaacgtgaagggtgtcagtggcacctggaaggacctgaccgacaacgtc
aacggtctcgcgtcgaatctgaccgtccagctgcgcgacgtgtcgcgcgtcgcgacggcg
atcgcgaacggcgatctgacccagaaggtcaccgtcgatgtgaagggcgagattctccag
atcaaggacgtcatcaacaagatggtcgaccagctgaactccttcgctgccgaggtgact
cgcgtcgcgaaggaggtcggcaccgagggcaagctcggcggtcaggccgaggtgcgcggc
gtgcgcggcacgtggaaggacctgacggacaacgtcaacgtcctcgcggcgaacctgacc
actcaggtccgtaacatcgcgaacgtcacgaccgcagtcgcgaacggcgatctctcgcag
aagatcaccgtcgatgcgcgcggcgagatcctcgagctgaagaacaccatcaacgtgatg
gtcgacacgctccgctcgttctccgcggaggtcacgcgcgtcgcgaaggaagtcggcacc
gagggcaagctcggcggtcaggcggacgtgaagggcgtcagtggcacgtggaaggacctg
acggacaacgtcaacgtcctcgcggcgaacctgacgactcaggtgcgcaacatcgcgaag
gtcacgaccgcggtcgcgaagggcgatctctcgcagaagatcacggtcgacgcgaagggc
gagatcctcgagctcaagaacaccatcaacacgatggtcgacaccctgaactcgttctcg
gccgaggtcactcgcgtcgcgaaggaggtcggcaccgagggcaagctcggcggtcaggcg
gacgtcaagggcgtctacggcacctggaaggacctgaccgacaacgtcaacgcgatggcg
tcgaacctgacggtccagctgcgcgacgtgtcgaaggtcgcgacggcgatcgcgaatggc
gacctgactcagaagatcaccgtcgacgtgaagggcgagattcttcagatcaaggacgtc
atcaacaagatggtcgaccagctgaactccttcgctgcggaagtgacccgcgtcgcgaag
gaggtcggcaccgagggcaagctgggtggccaggcggacgtgaagggcgtctacggcacc
tggaaggacctgaccgacaacgtcaacgcgatggcgtcgaacctgacggtccagctgcgc
gacgtgtcgaaggtcgcgacggcgatcgcgaatggcgacctgactcagaagatcaccgtc
gacgtgaagggcgagattcttcagatcaaggacgtcatcaacaagatggtcgaccagctg
aactccttcgctgcggaagtgacccgcgtcgcgaaggaagtcggcaccgagggcaagctc
ggcggtcaggccgaggtgcgcggcgtcagcggcgtctggaaggatctgaccgacaacgtc
aatcacatggccgccaacctgacgaagcaggtgcgcggcatcgtgaaggtcgtgaccgcg
gtcgcgaacggcgatctgagccagaagttcgtgctcgaagcgaagggcgaagtcgccgcg
ctcgccgagaccatcaacaacatgaccgacacgctgcgcatcttcgccgaccaggtgacg
acggtcgcgcgcgaggtcggcatcgaaggaaagctgggcggtcaggcgaaggtgcccggc
gccgccggcacgtggcgcgatctgacggacaacgtcaatcagctcgccggcaatctgacc
tcgcaggtccgcgcgatcgccgaagtcagcaccgcagtcgcgaagggcgatctctcgcgc
tcgatcacggtcgaggcgcagggagagctcgctgccctgaaggacacgatcaaccagatg
atcgggaacctgaaggacacgaccgacaagaaccaggagcaggactggctgaagacgaac
ctggcccgcttctccggcatgatgcagggccagcgcaacatcgtctcggtcgcgcagctg
atcatgagcgagctgacgccgctcgtggatgcgcagcacggcgccttctacctcatggag
gaagaggagccgcgcgagccgctgctgcacctcatcgcgagctacgggttcggcgggcgt
aagagcctcgcgaacaagtacaagctgcgcgagagcctgatcggtcagtgtgcgttcgag
aagaagcgcgtgctgctcggtgacgtgcccgagggcttcatctacatcgcgaccgggatg
ggcgaggcgccgccgcgcagcgtcgtcgtgctgccggtgctcttcgagggcgagacgaag
gcggtcatcgagctggcgtcgttcaagacgttcagcgcgaaccacctcacgttcctcgat
cagctgatggactccatcggcgtcatcctgaacatgatctcgtcgagcatgcggacggaa
gagctgctccagcagctcaagaagtccaacgcggagctcgaggcgcaggcggccgagctg
aacgacaaggcgaagctgctcgaggtgaagaacaacgaggtcgagctcgcgagccgctcg
ctggaagagaaggcggagcagctccagctgatctcgaagtacaagtccgagttcctcgcg
aacatgtcgcacgagctgcggacgccgctgaacagcctgctgatcctgtcgaagatgctc
gccgacaacgtgcaggggaacctgacgcccgagcaggtgaagttcgcgcagacggtctac
acgtcgggcaacgatctgctctcgctgatcaacgagatcctcgatctgtcgaaggtcgag
gcgggcaagatgccgatcgatccgcgcatcgcgccgaccgacgaggtgcgcgactacctc
gagcagacgttccggcacgtcgcgcagcagaagtcgctctcgttcgacatccggatggag
cagggcgtgccgcccgagctctacaccgacatctcgcgtctccagcagatcctcaagaac
ctgctgtcgaacgcgttcaagttcaccgcgcagggcggcgtcacgctcaccatcggccgc
gcgccgaaggatcgcggcgagaacgtggtcagcttcgcggtgacggataccggcatcggc
atcgcgcacgacaagcagaagctgatcttcgaggcgttccagcaggccgacggaacgacg
agccgcaagtacggcggcacgggcctcggcctcaccatcagccgcgagatcgcacgtctc
ctcggaggcaccatcgaggtgaagagcgagatcgatcacggcagcacgttcacgctctac
atcccggcgagctacgccggcgcggagtcggtccgcgcgctcgaagacggcccgagcgtg
gtcgacggcaccgtgatgatgctgcccgaggacgcgagcttcgcggggacgaaggtcctg
ctcgtcgacgacgacgtgcggaacctgttcgcgctgcggacgatcctcgaggcgcggaac
atccacgtcctgcacgccgagaacggtcggatcgcgctcgagatgctgcagacgcatccc
gacgtcgatctcgtgctgatggacacgatgatgcccgagatggacggcctctccgcgacg
cgggccatccgagacatcctgcagttccagacgctaccgatcgtctcgctgaccgcgaag
gcgatgaagggtgatcgcgagaaggcgatcgaagcgggagccactgattacgtgacgaag
ccggtcgaccccgacaacctgctggcggtcgtgcaccgttggctcccgaagcgccgtagc
gcagcgagcgtgccgtcgtga
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