Sandaracinus amylolyticus: DB32_003380
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Entry
DB32_003380 CDS
T03935
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
samy
Sandaracinus amylolyticus
Pathway
samy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DB32_003380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
samy03019
]
DB32_003380
03110 Chaperones and folding catalysts [BR:
samy03110
]
DB32_003380
03029 Mitochondrial biogenesis [BR:
samy03029
]
DB32_003380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
samy04147
]
DB32_003380
Enzymes [BR:
samy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DB32_003380
Messenger RNA biogenesis [BR:
samy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DB32_003380
Chaperones and folding catalysts [BR:
samy03110
]
Heat shock proteins
HSP60 / Chaperonin
DB32_003380
Mitochondrial biogenesis [BR:
samy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DB32_003380
Exosome [BR:
samy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DB32_003380
Exosomal proteins of other body fluids (saliva and urine)
DB32_003380
Exosomal proteins of breast cancer cells
DB32_003380
Exosomal proteins of colorectal cancer cells
DB32_003380
Exosomal proteins of bladder cancer cells
DB32_003380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Bap31_Bap29_C
Phage_scaffold
Motif
Other DBs
NCBI-ProteinID:
AKF06231
UniProt:
A0A0F6W327
LinkDB
All DBs
Position
complement(3871779..3873413)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEILYDTTARDRILAGVNTLANAVKVTLGPKGRNVVIEKSFGAPTVTKDGVTVAKEI
ELADKFENMGAQMVREVASKTSDVAGDGTTTATVLAQAVYREGSKMVAAGHNPMELKRGI
DAAVAAITEELKKLSKPTKDPKEIAQVGTISANGDETIGKILAEAMEKVGKEGVITVEEA
KGLETTLDVVEGMQFDRGYLSPYFVTDPERMEAILEDAYILISEKKISNMKDLLPVLEAI
ARQQKPLLILSEDVEGEALATLVVNKLRGTLHVAAVKAPGFGDRRKEMLKDIAILTGGEV
VSEELGIKLENVTLNDLGRAKRVRIDKENTTIVDGVGAKDAIKGRIETIKKQIEDTTSDY
DREKLQERLAKLVGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RAQSALDGLKLSDEQAVGVRIVRRAIEEPLRQISANAGVEGSIVVDKVKNGKGGFGYNAA
RDSYEDLISAGVIDPTKVVRTALQNASSVASLMLTTEALIAELPKEEKAAAGGGHAHGPG
GMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggaaattctctacgatacgaccgcgcgcgaccgcattctcgccggcgtc
aacacgctcgcgaacgcggtgaaggtcacgctgggccccaagggccgcaacgtcgtcatc
gagaagagcttcggcgctccgacggtcacgaaggacggcgtgacggtcgcgaaggagatc
gagctcgcggacaagttcgagaacatgggcgcgcagatggtgcgcgaggtcgccagcaag
acgtcggacgtcgcgggtgacggcaccacgacggcgaccgtgctcgcgcaggcggtctac
cgcgagggctcgaagatggtggccgcgggccacaacccgatggagctcaagcgcggcatc
gacgcggccgtcgcggcgatcaccgaggagctgaagaagctctcgaagccgacgaaggac
ccgaaggagatcgcgcaggtcggcacgatctcggcgaacggcgacgagacgatcggcaag
atcctcgccgaggcgatggagaaggtcggcaaggaaggcgtcatcacggtcgaggaggcg
aagggcctcgagaccacgctcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgacggatccggagcgcatggaggcgatcctcgaggacgcctacatc
ctgatctccgagaagaagatctcgaacatgaaggacctcctcccggtcctcgaggcgatc
gcgcgtcagcagaagccgctcctcatcctctcggaggacgtcgagggcgaggcgctcgcg
acgctcgtcgtgaacaagctccgcggcacgctacacgtcgcggcggtgaaggcgccgggc
ttcggcgatcgccgcaaggagatgctgaaggacatcgccatcctgacgggtggtgaggtc
gtcagcgaggagctcgggatcaagctcgagaacgtgaccctgaacgatctcggccgcgcg
aagcgcgtccggatcgacaaggagaacacgacgatcgtcgacggcgtgggcgcgaaggac
gcgatcaagggccgcatcgagacgatcaagaagcagatcgaggacacgacgagcgactac
gatcgcgagaagctccaggagcgcctcgcgaagctcgtcggcggcgtcgcggtcatcaag
gtcggcgcggcgaccgaggtcgagatgaaggagaagaaggcgcgcgtcgaggacgcgctc
cacgcgacccgcgcggccgtcgaggagggcatcgtccccggcggtggcgtggcgctcctt
cgcgcgcagtcggcgctcgacggcctcaagctcagcgacgagcaggcggtcggcgtgcgc
atcgtgcgccgcgcgatcgaggagcccctgcgccagatctcggcgaacgcgggcgtcgag
ggctcgatcgtcgtcgacaaggtcaagaacggcaagggcggcttcggctacaacgccgcg
cgcgactcgtacgaggacctgatctcggccggcgtcatcgacccgacgaaggtcgtccgc
accgcgctgcagaacgcgtcgtcggtcgcgagcctcatgctcacgaccgaggcgctcatc
gccgagctcccgaaggaggagaaggcggcggcgggcggcggtcacgcgcacggccccggc
ggcatggatttctga
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integrated database retrieval system
