Entry |
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Name |
(GenBank) Excinuclease ABC subunit A
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KO |
K03701 | excinuclease ABC subunit A |
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Organism |
samy Sandaracinus amylolyticus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:samy00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DB32_003493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:samy03400]
DB32_003493
DNA repair and recombination proteins [BR:samy03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DB32_003493
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DB32_003493
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4011508..4014330
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AA seq |
940 aa
MRARARGEPVSEKDAIVVRGARMHNLRDVDVDVPRGALTVVTGPSGSGKSSLAFDTIYAE
AQRRYVESLQTYARQFLEQLPKPDVDVIEGLSPAIAVRQEVPARNPRSTVGTVTEIHDFV
RVLYARVGQPHCPICGRPVSAWTVPEMVDRTLALGEGARVVVQAPIARGVVGDLAGELAR
LRKDGFVRVVIDGAVRDLGETISLDAKVAHDLDVQVDRVVVKDGVRQRLSDSIELGLRLG
GGIVRVVPQDGEPMLFTERHACPVHLVLLPPIAPRTFSWNSPEGACPTCGGLGELERFDE
ARVVPDPSKTIAEGAIVAWGAPREKAYRDRVSALKKAGIDVDAPWSALSAEMRDAVLNGL
VASKKKIEGVLASLERQWVELDARRGEDDDEALEGVAEELAKFRARGTCPTCGGARLRPE
ALGVTVGGLSIRALEALSIDDARAHVDALTLEGRQAEVAEPLLREVRSRLRFLADVGVGY
LSLDRSAGTLSSGEAQRIRLATRIGHALVGVLYVLDEPSIGLHPRDTGRLIETIRRLRDR
GSTVLVVEHDLDVVRAADRVIDMGPGAGTEGGRVIAVGTPDEIARDEQSLTGAFLARKRR
VGRARKTPRAPRGWITIRGATLHNLVGVDARVPVGVLTAVTGVSGAGKSSLVVGTLLEAA
RQVINGARGETVRAKVEGLDAFDRVIAIDDRPIGRTPRSNPATYSGIFGPLRELFASLPE
ARARGWDAGRFSFNQKGGRCETCKGEGVVRIDMQFLPDVLATCEVCGGRRYDRETLDVKW
RGLSIADVLDLTVSEARDLLGAVPAIRDRLDAIASVGLGYLTLGQSATTLSGGEAQRLAL
ARELARRATGRTLYVLDEPTTGLHLADVDVLIGVLEDLVEQGNTVVLIEHALEVVAAADW
VIDLGPEGGPGGGRVVVAGTPDEITNAPASHTGRLLRERA |
NT seq |
2823 nt +upstreamnt +downstreamnt
ttgcgcgcgcgtgctcgcggggagcccgtgagcgagaaggacgcgatcgtcgttcgcggc
gcgcggatgcacaacctgcgcgacgtcgacgtcgacgtgccgcgcggcgcgctcacggtc
gtcaccgggccgagcggatcgggcaagtcgtcgctcgcgttcgacacgatctacgcggag
gcgcagcgacgctacgtcgagtcgctgcagacctatgcgcgacagttcctcgagcagctg
ccgaagcccgacgtcgacgtgatcgaggggctctcgccggcgatcgcggttcgccaggaa
gtgcccgcgcgcaacccgcgatcgacggtcggcacggtcaccgagatccacgacttcgtg
cgcgtgctctacgcgcgcgtcggtcagccgcactgtccgatctgcggtcgtccggtgagc
gcgtggacggttcccgagatggtcgatcgcacgctcgcgctgggtgaaggcgcgcgcgtg
gtggtgcaggcgccgatcgcgcgcggcgtggtcggcgatctcgcgggcgagctcgcgagg
ttgcgcaaggacggcttcgtgcgcgtcgtgatcgacggcgcggtgcgcgatctcggcgag
acgatctcgctcgacgcgaaggtcgcgcacgacctcgacgtgcaggtcgatcgcgtggtc
gtgaaggacggagtgcggcagcgcctgtccgactcgatcgagctcgggttgcggctcggc
ggcggcatcgtgcgcgtggtgccgcaggacggcgagccgatgctgttcaccgagcgccac
gcgtgcccggtgcatctcgtgctcttgccgcccatcgcgccgcgcacgttctcgtggaac
tcgcccgagggcgcgtgcccgacgtgcggaggtctcggtgagctcgagcgcttcgacgaa
gcgcgcgtcgtgccggatccgtcgaagacgatcgcggagggcgcgatcgtggcgtggggc
gcgccgcgcgagaaggcctatcgcgatcgcgtgagcgcgctgaagaaggcggggatcgac
gtcgacgcgccgtggagcgcgctctccgccgagatgcgcgacgcggtgctgaacgggctc
gtcgcgtcgaagaagaagatcgagggcgtgctcgcgtcgctcgagcgacagtgggtcgag
ctcgatgcgcgtcgcggcgaggacgacgacgaagcgctcgaaggagtcgcggaggagctc
gcgaagttccgtgcgcgcgggacgtgcccgacgtgcggcggcgcgcggcttcgccccgag
gcgctcggcgtgacggtgggtgggctctcgatccgcgcgctcgaggcgctctcgatcgac
gacgcacgcgcgcacgtcgacgcgctgacgctcgaagggcgacaggccgaggtcgccgag
ccgctgctgcgcgaggtgcgatcgcggctgcggttcctcgcggacgtgggcgtcggctat
ctgtcgctcgatcgatccgcgggcacgctctcgagcggcgaggcgcagcgcatccgcctc
gcgacgcgcatcgggcacgcgctggtcggcgtgctctacgtgctcgacgagccttcgatc
ggcctgcatccgcgggacacggggcgcttgatcgagaccatccgtcgccttcgcgatcgc
ggcagcacggtgctggtggtcgagcacgatctcgacgtcgtgcgcgccgccgatcgtgtg
atcgacatgggcccgggcgcgggcaccgagggcggacgtgtgatcgcggtcggcacgccc
gacgagatcgcgcgcgacgagcagtcgctgacgggcgcgttcctcgcgcggaagcgacgc
gtgggccgcgcgcgcaagacgccgcgggcgccgcgcggatggatcacgatccgcggcgcg
acgctgcacaacctcgtcggcgtcgacgcgcgcgtgccggtcggcgtgctcaccgcggtc
acgggcgtgagcggcgcgggcaagtcgtcgctcgtcgtcggcacgctgctcgaggccgcg
cgacaggtgatcaacggtgcgcgcggcgagacggtgcgcgcgaaggtcgaggggctcgac
gcgttcgatcgtgtgatcgcgatcgacgatcgtccgatcggtcgcacgccgcgctcgaac
cccgcgacgtactcggggatcttcggcccgctgcgcgagctcttcgcgtcgctgcccgag
gcgcgcgcgcgtggctgggacgcggggcgcttcagcttcaaccagaagggcgggcgctgc
gagacgtgcaagggcgagggcgtcgtccggatcgacatgcagttcctcccggacgtgctc
gcgacgtgcgaggtgtgcggcgggcgtcgctacgatcgcgagacgctcgacgtgaagtgg
cgcgggctgtcgatcgccgacgtgctcgacctgacggtgagcgaggcgcgcgatctgctc
ggcgcggtgcccgcgatccgcgatcggctggacgcgatcgcgtcggtggggctcggctat
ctcacgctcggacagagcgcgacgacgctctccggtggcgaagcgcagcgcctcgcgctc
gcgcgcgagctcgcacgacgcgcgacggggcgcacgctctacgtgctcgacgagccgacg
accgggctgcacctcgcggacgtcgacgtgctgatcggcgtgctcgaggatctcgtcgag
cagggcaacacggtcgtgctcatcgagcacgcgctcgaggtggtcgcggccgcggactgg
gtgatcgatctcggtcccgagggcgggccgggcggtggtcgcgtcgtcgtcgcgggcacg
cccgacgagatcacgaacgcgcccgcgtcgcacaccggacggctgctgcgcgagcgcgcg
tga |