KEGG   Sandaracinus amylolyticus: DB32_003493
Entry
DB32_003493       CDS       T03935                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
samy  Sandaracinus amylolyticus
Pathway
samy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:samy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DB32_003493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:samy03400]
    DB32_003493
DNA repair and recombination proteins [BR:samy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DB32_003493
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DB32_003493
SSDB
Motif
Pfam: UvrA_inter ABC_tran UvrA_DNA-bind AAA_21 nSTAND1 AAA_29 AAA_16 AAA_25 DnaJ_CXXCXGXG RraA-like AAA_23 BCA_ABC_TP_C DUF4350
Other DBs
NCBI-ProteinID: AKF06344
UniProt: A0A0F6SF53
LinkDB
Position
4011508..4014330
AA seq 940 aa
MRARARGEPVSEKDAIVVRGARMHNLRDVDVDVPRGALTVVTGPSGSGKSSLAFDTIYAE
AQRRYVESLQTYARQFLEQLPKPDVDVIEGLSPAIAVRQEVPARNPRSTVGTVTEIHDFV
RVLYARVGQPHCPICGRPVSAWTVPEMVDRTLALGEGARVVVQAPIARGVVGDLAGELAR
LRKDGFVRVVIDGAVRDLGETISLDAKVAHDLDVQVDRVVVKDGVRQRLSDSIELGLRLG
GGIVRVVPQDGEPMLFTERHACPVHLVLLPPIAPRTFSWNSPEGACPTCGGLGELERFDE
ARVVPDPSKTIAEGAIVAWGAPREKAYRDRVSALKKAGIDVDAPWSALSAEMRDAVLNGL
VASKKKIEGVLASLERQWVELDARRGEDDDEALEGVAEELAKFRARGTCPTCGGARLRPE
ALGVTVGGLSIRALEALSIDDARAHVDALTLEGRQAEVAEPLLREVRSRLRFLADVGVGY
LSLDRSAGTLSSGEAQRIRLATRIGHALVGVLYVLDEPSIGLHPRDTGRLIETIRRLRDR
GSTVLVVEHDLDVVRAADRVIDMGPGAGTEGGRVIAVGTPDEIARDEQSLTGAFLARKRR
VGRARKTPRAPRGWITIRGATLHNLVGVDARVPVGVLTAVTGVSGAGKSSLVVGTLLEAA
RQVINGARGETVRAKVEGLDAFDRVIAIDDRPIGRTPRSNPATYSGIFGPLRELFASLPE
ARARGWDAGRFSFNQKGGRCETCKGEGVVRIDMQFLPDVLATCEVCGGRRYDRETLDVKW
RGLSIADVLDLTVSEARDLLGAVPAIRDRLDAIASVGLGYLTLGQSATTLSGGEAQRLAL
ARELARRATGRTLYVLDEPTTGLHLADVDVLIGVLEDLVEQGNTVVLIEHALEVVAAADW
VIDLGPEGGPGGGRVVVAGTPDEITNAPASHTGRLLRERA
NT seq 2823 nt   +upstreamnt  +downstreamnt
ttgcgcgcgcgtgctcgcggggagcccgtgagcgagaaggacgcgatcgtcgttcgcggc
gcgcggatgcacaacctgcgcgacgtcgacgtcgacgtgccgcgcggcgcgctcacggtc
gtcaccgggccgagcggatcgggcaagtcgtcgctcgcgttcgacacgatctacgcggag
gcgcagcgacgctacgtcgagtcgctgcagacctatgcgcgacagttcctcgagcagctg
ccgaagcccgacgtcgacgtgatcgaggggctctcgccggcgatcgcggttcgccaggaa
gtgcccgcgcgcaacccgcgatcgacggtcggcacggtcaccgagatccacgacttcgtg
cgcgtgctctacgcgcgcgtcggtcagccgcactgtccgatctgcggtcgtccggtgagc
gcgtggacggttcccgagatggtcgatcgcacgctcgcgctgggtgaaggcgcgcgcgtg
gtggtgcaggcgccgatcgcgcgcggcgtggtcggcgatctcgcgggcgagctcgcgagg
ttgcgcaaggacggcttcgtgcgcgtcgtgatcgacggcgcggtgcgcgatctcggcgag
acgatctcgctcgacgcgaaggtcgcgcacgacctcgacgtgcaggtcgatcgcgtggtc
gtgaaggacggagtgcggcagcgcctgtccgactcgatcgagctcgggttgcggctcggc
ggcggcatcgtgcgcgtggtgccgcaggacggcgagccgatgctgttcaccgagcgccac
gcgtgcccggtgcatctcgtgctcttgccgcccatcgcgccgcgcacgttctcgtggaac
tcgcccgagggcgcgtgcccgacgtgcggaggtctcggtgagctcgagcgcttcgacgaa
gcgcgcgtcgtgccggatccgtcgaagacgatcgcggagggcgcgatcgtggcgtggggc
gcgccgcgcgagaaggcctatcgcgatcgcgtgagcgcgctgaagaaggcggggatcgac
gtcgacgcgccgtggagcgcgctctccgccgagatgcgcgacgcggtgctgaacgggctc
gtcgcgtcgaagaagaagatcgagggcgtgctcgcgtcgctcgagcgacagtgggtcgag
ctcgatgcgcgtcgcggcgaggacgacgacgaagcgctcgaaggagtcgcggaggagctc
gcgaagttccgtgcgcgcgggacgtgcccgacgtgcggcggcgcgcggcttcgccccgag
gcgctcggcgtgacggtgggtgggctctcgatccgcgcgctcgaggcgctctcgatcgac
gacgcacgcgcgcacgtcgacgcgctgacgctcgaagggcgacaggccgaggtcgccgag
ccgctgctgcgcgaggtgcgatcgcggctgcggttcctcgcggacgtgggcgtcggctat
ctgtcgctcgatcgatccgcgggcacgctctcgagcggcgaggcgcagcgcatccgcctc
gcgacgcgcatcgggcacgcgctggtcggcgtgctctacgtgctcgacgagccttcgatc
ggcctgcatccgcgggacacggggcgcttgatcgagaccatccgtcgccttcgcgatcgc
ggcagcacggtgctggtggtcgagcacgatctcgacgtcgtgcgcgccgccgatcgtgtg
atcgacatgggcccgggcgcgggcaccgagggcggacgtgtgatcgcggtcggcacgccc
gacgagatcgcgcgcgacgagcagtcgctgacgggcgcgttcctcgcgcggaagcgacgc
gtgggccgcgcgcgcaagacgccgcgggcgccgcgcggatggatcacgatccgcggcgcg
acgctgcacaacctcgtcggcgtcgacgcgcgcgtgccggtcggcgtgctcaccgcggtc
acgggcgtgagcggcgcgggcaagtcgtcgctcgtcgtcggcacgctgctcgaggccgcg
cgacaggtgatcaacggtgcgcgcggcgagacggtgcgcgcgaaggtcgaggggctcgac
gcgttcgatcgtgtgatcgcgatcgacgatcgtccgatcggtcgcacgccgcgctcgaac
cccgcgacgtactcggggatcttcggcccgctgcgcgagctcttcgcgtcgctgcccgag
gcgcgcgcgcgtggctgggacgcggggcgcttcagcttcaaccagaagggcgggcgctgc
gagacgtgcaagggcgagggcgtcgtccggatcgacatgcagttcctcccggacgtgctc
gcgacgtgcgaggtgtgcggcgggcgtcgctacgatcgcgagacgctcgacgtgaagtgg
cgcgggctgtcgatcgccgacgtgctcgacctgacggtgagcgaggcgcgcgatctgctc
ggcgcggtgcccgcgatccgcgatcggctggacgcgatcgcgtcggtggggctcggctat
ctcacgctcggacagagcgcgacgacgctctccggtggcgaagcgcagcgcctcgcgctc
gcgcgcgagctcgcacgacgcgcgacggggcgcacgctctacgtgctcgacgagccgacg
accgggctgcacctcgcggacgtcgacgtgctgatcggcgtgctcgaggatctcgtcgag
cagggcaacacggtcgtgctcatcgagcacgcgctcgaggtggtcgcggccgcggactgg
gtgatcgatctcggtcccgagggcgggccgggcggtggtcgcgtcgtcgtcgcgggcacg
cccgacgagatcacgaacgcgcccgcgtcgcacaccggacggctgctgcgcgagcgcgcg
tga

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