Sandaracinus amylolyticus: DB32_004030
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Entry
DB32_004030 CDS
T03935
Name
(GenBank) Response regulator of zinc sigma-54-dependent two-component system
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
samy
Sandaracinus amylolyticus
Pathway
samy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DB32_004030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
samy02022
]
DB32_004030
02035 Bacterial motility proteins [BR:
samy02035
]
DB32_004030
Two-component system [BR:
samy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
DB32_004030
Bacterial motility proteins [BR:
samy02035
]
Pilus system
Twitching motility proteins
DB32_004030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA
AAA_16
Mg_chelatase
bpMoxR
AAA_3
AAA_22
HTH_30
AAA_30
VpsR
HTH_28
TIP49
nSTAND3
AAA_7
IIGP
Motif
Other DBs
NCBI-ProteinID:
AKF06881
UniProt:
A0A0F6W3Y4
LinkDB
All DBs
Position
complement(4637991..4639397)
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AA seq
468 aa
AA seq
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MRAMAARILVCDDEASLREMLGVLLRRAGYETELVSDVTTARARVATATPYDLVITDLAL
PDGTGMDVLAAARERDDALQVVVITAFGSTENAVQAMRLGAYDYIQKPFRNHELLVLLEK
ALEKRKLASENRVLRARVAEQEKPVPGLLGSSPAMRRVMDLVRRVAGARTSVLITGESGT
GKEMVARALHQLGERASGPFIVVNCGALPEALMESELFGHEKGAFTGATQRNEGLFRAAE
SGTLFLDEIGELAPALQVKLLRVLQERKVRPVGGQREIETDVRVVAATNRDLEKEVAEGR
FRSDLFYRLNVIRLQLPPLRERPEDVPALAEHFLQKHASLAGKTLRYSPAAMRWLAAHDY
PGNVRELENVVERAVTLALGEEVTLDDLPEGGPQVGKATTLPSADIAPGFDIDRWLGELE
KGLLLRALEQTKGNQTAAARLLGTTFRSFRYRLRKFGLAEGDSSDDEK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcgatggccgcgcggatcctcgtgtgcgacgacgaggccagcctccgcgagatg
ctgggtgtcctcctgcgtcgcgccggctacgagaccgagctcgtctccgacgtcaccacc
gcgcgcgcacgggtcgcgaccgccacgccgtacgacctcgtcatcacggatctcgcgctg
cccgacggcaccggcatggacgtcctcgctgccgcgcgcgagcgcgacgacgcgctccag
gtcgtcgtcatcaccgcgttcggcagcaccgagaacgcggtgcaggccatgcggctcggc
gcgtacgactacatccagaagccgttccgcaaccacgagctcctggtgctgctcgagaag
gcgctcgagaagcgcaagctcgcctccgagaaccgcgtcctgcgcgcgcgcgtcgcggag
caggagaagcccgtccccggcctgctcggcagctcgccggcgatgcgccgcgtgatggac
ctcgtccggcgcgtcgccggcgcgcgcacgagcgtgctgatcaccggcgagagcggcacc
ggcaaggagatggtcgcgcgcgcgctgcaccagctgggcgagcgcgcgagcggcccgttc
atcgtcgtcaactgcggcgcgctccccgaggcgttgatggagagcgagctcttcgggcac
gagaagggcgcgttcaccggcgcgacgcagcgcaacgagggcctctttcgcgccgcggag
agcggcacgctgttcctcgacgagatcggcgagctcgcgcccgcgctccaggtgaagctc
ctgcgcgtcctccaggagcgaaaggtccgcccggtcggcggtcagcgcgagatcgagacc
gacgtgcgcgtcgtcgccgcgacgaaccgcgacctcgagaaggaagtcgccgagggtcgc
ttccgcagcgacctcttctaccggctgaacgtcatccgcctgcagctgccgccgctccgc
gagcgcccggaggacgtccccgcgctcgccgagcacttcctccagaagcacgcctcgctc
gcggggaagaccctccgctactcgcccgccgcgatgcgctggctcgcggcccacgactac
cccggcaacgtccgcgagctcgagaacgtcgtcgagcgcgccgtcaccctcgcgctcggc
gaagaggtcacgctcgacgacctgcccgaaggcggcccccaagtgggcaaggcgaccacc
ctgccctccgccgacatcgcgccggggttcgacatcgatcgctggctgggcgagctcgag
aaggggctgctgctccgcgcgctcgagcagacgaaaggcaaccagacggcggccgcgcgc
ctgctcggcaccacatttcgctcctttcgctaccgtctgcgcaagttcggcctcgccgag
ggcgactcgagcgacgacgagaagtga
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