Sandaracinus amylolyticus: DB32_004426
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Entry
DB32_004426 CDS
T03935
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
samy03021
]
DB32_004426
Transcription machinery [BR:
samy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DB32_004426
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_28
GntR
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AKF07277
UniProt:
A0A0F6W4R0
LinkDB
All DBs
Position
5106029..5107129
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AA seq
366 aa
AA seq
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MARKTPKAKRSDEESESTDDVLAGEVVDEREEARDDDEGSEASEQEPRDDDEALEGDVVV
EGEVVDEVDLAEPLPARPATGAALTTQDPLQAYMRDVQRYSLLTPEQTHELAVKYVESGD
VEAARKLVTSNLRLVVKIAYDYRRAYRNILDLIQEGNIGLMQAVKKYDPYRGVKLSSYAA
WWIRAYILRFILNNWRLVKLGTTQAQRKLFFNLKKEKARLSAMGIDPTPEVVAKNLDVTT
DDVVQMDRRLGAGELSLDAPVGHGDGKPTSRIDTLAALDSPADELLASAELEDLLTEKIR
EFGQTLKGKEDVIFRERLMSDEPKTLQELGEQFGVSRERVRQIEKRLQGKIRAYLEQHVE
ASALPS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagacacccaaggcgaagcgctccgacgaggagagcgagagcacggacgac
gtgctcgcgggcgaggtcgtggacgagcgcgaagaagcacgcgacgacgacgagggctcg
gaggcgtcggagcaggagccgcgcgacgacgacgaggcgctcgagggcgacgtcgtcgtc
gagggcgaggtcgtcgacgaggtcgatctcgcggagccgctccccgcgcgccccgccacc
ggcgccgcgctcacgacgcaggacccgctccaggcgtacatgcgcgacgtgcagcgctac
tcgctgctcacgcccgagcagacgcacgagctcgcggtgaagtacgtggagagcggcgac
gtcgaggcggcgcgcaagctggtcacgtcgaacctgcggctcgtcgtgaagatcgcgtac
gactaccgccgcgcgtaccgcaacatcctcgacctgatccaggaggggaacatcggcctg
atgcaggccgtgaagaagtacgacccctaccgcggcgtgaagctctcgtcgtacgcggcg
tggtggatccgcgcgtacatcctgcggttcatcctgaacaactggcgtctcgtgaagctc
gggacgacgcaggcgcagcgcaagctcttcttcaacctgaagaaggagaaggcgcgcctg
tcggcgatggggatcgatcccacgcccgaggtggtcgcgaagaacctcgacgtcaccacc
gacgacgtggtgcagatggatcgtcgtctcggcgcgggtgagctctcgctcgacgcgccg
gtcggccacggcgatggaaagccgacgtcgcggatcgacacgctggcggcgctcgactcg
ccggcggacgagctgctcgcgagcgcggagctcgaggacctgctgaccgagaagatccgc
gagttcgggcagacgctgaagggcaaggaagacgtgatcttccgcgagcgcctgatgagc
gacgagccgaagacgctgcaggaactcggcgagcaattcggcgtgagccgcgagcgcgtg
cggcagatcgagaagcgcctccaggggaagatccgggcgtacctcgagcagcacgtcgaa
gcctcggcgttgccctcgtga
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