Sandaracinus amylolyticus: DB32_004558
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Entry
DB32_004558 CDS
T03935
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
samy03032
]
DB32_004558
03400 DNA repair and recombination proteins [BR:
samy03400
]
DB32_004558
Enzymes [BR:
samy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DB32_004558
DNA replication proteins [BR:
samy03032
]
Prokaryotic type
DNA Topoisomerases
DB32_004558
DNA repair and recombination proteins [BR:
samy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DB32_004558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HPIP
Motif
Other DBs
NCBI-ProteinID:
AKF07409
UniProt:
A0A0F6SFR6
LinkDB
All DBs
Position
5257774..5259243
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AA seq
489 aa
AA seq
DB search
MLRSLLRSGHLTLSFVRFVRARAATATGTLRGRHRADSVPRAGRRASRCALARHDAPRSR
WHVRCDAPYVMGAHPSEAAQLLADAVESARSAGLHYVSDEQPGIRRLPTRSPRRFRYVDP
AGKDVKDEATLARIDALRIPPAWTDVWICRDPRGHIQATGRDARKRKQYRYHERWRDVRD
ATKFEKILDFARALPTIRARVTADLAQRELSRARVLATAVRLLDTTAIRVGNEEYTRENH
SYGLTTLTRRHVKLQGDEIAFHFRGKSGKERFVSVRDPRVARVVRKCAELPGQVLLKYRA
EDGSLHAIHSHDVNEYLREAAGDAFTAKDFRTWSATVLAGLALRRICSGEAPPRSVEKQV
VAAIKAVAEVLGNTPAVCRKCYVHPLVVEAHKDGALLVAMERSLARVKEPVAHGLRPEEA
AVLAFLQRRLHVDGTVRARSKKVAPALAAARVTASRTTRPRAPRATDREARRLARGARPR
STRAHSVDR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgctgagaagtcttcttcgctccggccatctcacgctctccttcgttcgattcgttcgt
gcgcgcgccgccaccgcgacgggcacgctgcgggggcgccatcgagcagattccgtaccg
cgtgcggggcgacgcgcgtcgcggtgcgccctggcgaggcacgacgcgccgcgctctcgg
tggcacgtccgctgcgatgcgccctacgtcatgggcgcacacccttccgaggccgcgcag
ctcctcgcggacgcggtggagtccgcgcgctccgccggcctgcactacgtcagcgacgag
cagcccggcattcgccggctccccacgcgctcgccgcgccgcttccgctacgtcgatccg
gcaggaaaggacgtgaaggacgaggcgacgctcgcgcgcatcgacgcgctgcggatcccg
cccgcgtggaccgacgtgtggatctgccgcgacccgcgcgggcacatccaggcgaccggc
cgcgacgcgcgaaagcgcaagcagtaccgctatcacgagcgctggcgcgacgtgcgcgac
gcgacgaagttcgagaagatcctcgacttcgcgcgggcgctcccgaccatccgcgcgcgc
gtcaccgccgacctcgcgcagcgcgagctgtcccgcgcgcgcgtgctcgcgaccgcggtg
cggctgctcgacaccaccgccatccgcgtgggcaacgaggagtacacgcgcgagaaccac
tcgtacggtctgaccacgctcacgcgccgccacgtgaagctgcagggcgacgagatcgcg
ttccatttccgcggaaagagcggcaaggagcgcttcgtgtcggtgcgcgatccgcgcgtc
gcgcgcgtggtgcgcaagtgcgccgagctgcccggacaggtgctcctgaagtaccgcgcc
gaggacggctcgctgcacgcgatccactcgcacgacgtgaacgagtatctgcgcgaggcc
gcgggtgacgcgttcaccgcgaaggacttccgcacgtggtccgcgaccgtgctcgccggc
ctcgcgctgcggcggatctgcagcggagaggcgcctccgcgctcggtcgagaagcaggtc
gtcgcggcgatcaaagcggtcgccgaggtgctcggcaacacgcccgcggtctgccgcaag
tgctacgtgcacccgctcgtcgtcgaagcgcacaaggacggtgcgctgctcgtcgcgatg
gagcgctcgctcgcgcgcgtgaaggagcccgtcgcgcacgggctgcgccccgaagaggcc
gccgtgctcgcgttcctccagcgccggctgcacgtcgacggcacggtgcgcgcgcggtcg
aagaaggtcgcgccggcgctcgccgcggcgcgcgtgacggcgtcgcgaacgacgcgccct
cgcgctccgcgtgcgaccgatcgcgaggcacgccgcctcgcacgtggcgctcgccctcga
tccactcgtgcacactccgtggatcggtga
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