Sandaracinus amylolyticus: DB32_005703
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Entry
DB32_005703 CDS
T03935
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
samy03016
]
DB32_005703
Enzymes [BR:
samy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DB32_005703
Transfer RNA biogenesis [BR:
samy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DB32_005703
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKF08554
UniProt:
A0A0F6SGE5
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All DBs
Position
complement(6622669..6623793)
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AA seq
374 aa
AA seq
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MIDRPEELERLARALAAAPAIGLDTEGDGLYRYRTRLCTMQIAHPQGVALIDTLAIVDRR
ALAPILGAAGPEKVLHDCAFDARLLAREGLPLANVFDTAVAARFLGELSTGLSSLLGKHL
GVSIGKDLQQADWGKRPLDDAERAYLEQDVRHLLPLASLLRERCADAEILEEVRVESAWA
ASANAEPEEEPGPAWLRVKGAGDLRTGAQRAVLREIAALRERIAQDEDVPPFRVLPNPVL
IVIARKMPRDRAALDAIHALAKRPELAPAILEAVARGLDAREVPRDELDLLRPPAPPFEQ
RERRKRIETALTTWRKAEADARGVNVQVVLPGHCLRDLAGRAPSDERELLDVPGFGACRV
ERYGRVVIQIVKGA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtcccgaagagctcgagcgcctcgcgcgcgcgctcgccgccgcgccggcg
atcggtctcgacaccgagggcgatggcctctatcgctaccgcacgcgcctctgcacgatg
cagatcgcgcacccgcagggcgtcgcgctgatcgacacgctcgcgatcgtcgatcgtcgc
gcgctcgcgccgatcctcggcgcggcagggccggagaaggtgctgcacgactgcgcgttc
gacgcgcgcctcctcgcgcgcgaggggctgccgctcgcgaacgtgttcgacaccgcggtc
gcggcgcgcttcctcggcgagctctcgacggggctctcgtcgctgctcggcaagcacctc
ggcgtgtcgatcggcaaggacctgcagcaggcggactggggcaagcgcccgctcgacgac
gcggagcgcgcgtacctcgagcaagacgtgcggcacctgctcccgctcgcgtcgctgctg
cgcgagcgctgcgccgacgcggagatcctcgaggaggtgcgcgtggagtcggcgtgggcc
gcgagcgcgaacgccgagcccgaggaagagcccgggcccgcgtggctgcgcgtgaagggc
gccggcgatctgcgcaccggcgcgcagcgcgcggtgctgcgcgagatcgcggcgctgcgc
gagcgcatcgcgcaggacgaggacgtgccgccgttccgcgtgctgccgaacccggtgctg
atcgtgatcgcgcgcaagatgccgcgcgatcgcgcggcgctcgacgcgatccacgcgctc
gcgaagcggcccgagctcgcgcccgcgatcctcgaagcggtcgcgcgcggcctcgacgcg
cgcgaggtgccgcgcgacgagctcgatctgctgcgtcctcctgcgccgcccttcgagcag
cgcgagcgtcgcaagcgcatcgagacggcgctcacgacgtggcgcaaggccgaggccgac
gcgcgcggcgtgaacgtgcaggtcgtgctgccggggcactgcctccgcgatctcgcgggg
cgcgcgcccagcgacgagcgcgagctcctcgacgtccccggcttcggtgcgtgccgcgtc
gagcgctacgggcgcgtggtgatccagatcgtcaagggagcttga
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