Sandaracinus amylolyticus: DB32_008178
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Entry
DB32_008178 CDS
T03935
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samy03400
]
DB32_008178
Enzymes [BR:
samy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DB32_008178
DNA repair and recombination proteins [BR:
samy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DB32_008178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AKF11029
UniProt:
A0A0F6SHU0
LinkDB
All DBs
Position
complement(9469526..9472789)
Genome browser
AA seq
1087 aa
AA seq
DB search
MDRRLIESESAAARVASAAAWLGARRASAVWIVGARREPVDALVRRVASEQGAALGWERT
TLDALAGRVAARALARRGLTPVAGTAVEALCARLLHRMRARDVARLGRYAAIADRPGLPR
ALASTLEELAHADLAPEVVRAHAPDLAALYAAYRDELPALGLADRATVLEHATATLREGR
AVDVERAVLLLDVRVRSRLEADLVAALIARAPSALVTIPRGDDRTRALLCERVDLAIEPA
THAVEVAPALRALQARIFEDARDAVASDEAVEILSAPGESRECVEIARRVLVAAREGTRF
DRMAVLLRAPERYGVHLAEAFRRAGIPASFSRGARRPDPTGRALLALLACAAEGISARAF
GEYLSLGVVPDAEGGAPPDAKGARARFVPADEELAASDDDADDESGLAPIDEDAYDETAP
VRAGTLRAPRRWEQLIVEAAVIGGRDRWARRIEGAIAAARRAREDLEDPDDVEGRRHARR
IADLEALRDFALPLVDALAALPGRATWSAWIDALSALATRALRDPRRVLAVLASLAPMGD
VGPVDLAEVRTVLTPRLREEPARAPGDESVGQVLVCTIEEARGRELDVVFVPGLAEKLFP
AKVIEDPLLLDATREAISEALATRRERGAEERLALRIALGAASKRVVASIPRIDVERARP
RVPSFYALEIARAIEGRLPSYEELGRRAEIAGAARLGWPAPDHPELAIDAAEHDLSVLGG
LVDLPPKARIGRAAYLVAASPIVARALRARWARWDKKRWRSQDGMVEPDEGVRAILAEHR
LDRRAYSATALESFAMCPYKFYLRTIIRLEPREVPEPLEMLDPAQRGTLVHAAQFRLLVR
LRDEGALPVTPETRARALEVLDEELDRVARTTAEELAPAIPKVWEDTLAAVRQDLREWLH
RTSEDPSWVPSRFELAFGIPAGDERDAASLHEPVPLSIGMRLRGAIDLVEEREGTLRATD
HKTGSAWTKPGQRVMGGEKLQPILYALALESIFPDRTVWGGRLYYCTDKGRYTEVEVPLD
DDSRAAITKVTTTIDQHVRDGFLPPAPSEKACSFCDYAVICGPHERRRTMRKEGDRLVGI
DSLRRMP
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaggctgatcgagagcgagagcgcggccgcgcgcgtggcgagcgctgccgcg
tggctcggggcgcgtcgtgcgtcggcggtgtggatcgtcggtgcgcgtcgcgagccggtc
gacgcgctggtgcgtcgggtcgcgtccgagcagggcgcggcgctcgggtgggagcgcacg
acgctcgacgcgctcgcggggcgggtcgcggcgcgcgcgctggcgcgtcgtgggctcaca
ccggtcgcgggcaccgcggtcgaggcgctctgcgcgcggctgctgcatcgcatgcgggcg
cgcgacgtcgcgcggctcggacgttatgccgccatcgcggatcgaccgggcctgccgcgc
gcgctcgcgtcgacgctcgaggagctcgcgcacgccgatctcgcgcccgaggtggtgcgc
gcgcacgcgcccgatctcgcggcgctctacgcggcgtaccgcgacgagctgccggcgctc
gggctcgcggatcgcgcgaccgtgctcgagcacgcgaccgcgacgctgcgcgaagggcgc
gcggtcgacgtcgagcgcgcggtgctgctgctcgacgtgcgggtgcgatcgcgcctcgag
gccgacctcgtcgcggcgctgatcgcgcgcgcgccgagcgcgctggtgacgatcccgcgc
ggcgacgaccgcacgcgcgcgctgctgtgcgagcgcgtcgacctcgcgatcgagcccgcg
acgcacgccgtggaggtcgcgcctgcgctgcgcgcgctccaggcgcgcatcttcgaggac
gcgcgcgacgcggtcgcgagcgacgaggcggtcgagatcctctcggcgcccggcgagagc
cgcgagtgcgtggagatcgcgcggcgagtgctcgtcgcggcgcgcgagggcacgcgcttc
gatcgcatggcggtgctgctgcgcgcgcccgagcgctacggcgtgcacctcgcggaggcg
ttccgccgcgcggggattcctgcgtcgttcagccgcggcgcgcgtcggcccgatcccacg
gggcgtgcgctgctcgcgctgctcgcgtgcgccgcggaggggatctcggcgcgcgcgttc
ggcgagtacctctcgctcggcgtggtgcccgacgccgaaggcggcgcgccgcccgacgcg
aagggggcgcgcgcgcggttcgtgcccgccgacgaagagctcgcggcgagcgacgacgat
gcggacgacgagagcgggctcgcgccgatcgacgaggacgcgtacgacgagactgcgccg
gtgcgcgcgggcacgctgcgcgcgccgcggcgctgggagcagctgatcgtcgaggccgcg
gtgatcggcgggcgcgatcgctgggcgcgtcgcatcgagggcgcgatcgcggcggcgcgt
cgcgcccgtgaagatctcgaggaccccgacgacgtcgagggtcgccgtcacgcccggcgc
atcgcggacctcgaggcgctgcgcgacttcgcgctgccgctggtcgacgcgctcgccgcg
ctgcccgggcgtgcgacgtggtccgcgtggatcgacgcgctctccgcgctcgcgacccgc
gcgctgcgtgatcctcggcgcgtgctcgcggtgctcgcatcgctcgcgccgatgggcgac
gtcggcccggtcgacctcgcggaggtgcgcaccgtgctcacgccgcggctgcgcgaagag
ccggcgcgcgcgccgggcgacgagagcgtcggtcaggtgctcgtgtgcacgatcgaggaa
gcgcgcggacgcgagctcgacgtcgtgttcgtgcccggcctcgcggagaagctctttccc
gcgaaggtcatcgaagatccgctgctgctcgacgcgacccgtgaggcgatctccgaggca
ctggccacgaggcgcgagcggggcgcggaggagcgcctcgcgctgcgcatcgcgctcggc
gccgcgagcaagcgcgtggtcgcgtcgatcccgcgcatcgacgtggagcgcgcgcgaccg
cgcgtgccttcgttctacgcgctcgagatcgcgcgcgcgatcgaggggcgcctgccttcg
tacgaagagctcggacgtcgcgccgagatcgcgggcgcagcacgcctcggatggcccgcg
cccgatcaccccgagctcgcgatcgacgcggcggagcacgacctctcggtgctcggtggg
ctcgtcgatctaccgccgaaggcgcggatcgggcgcgcggcgtacctcgtcgcggcgagc
ccgatcgtcgcgcgcgccctgcgcgctcgatgggcgcgctgggacaagaagcgctggcgc
tcgcaggacggaatggtcgagcccgacgagggcgtgcgcgcgatcctcgccgagcatcgc
ctcgatcgccgcgcgtactccgcgaccgcgctcgagagcttcgcgatgtgcccgtacaag
ttctatctgcgcacgatcatccggctcgagccgcgcgaggtccccgagccgctcgagatg
ctcgaccccgcgcagcgcgggacgctggtgcacgcggcgcagttccgcttgctggtgcgt
ctgcgcgacgagggtgcgctgccggtcacgcccgagacgcgggcgcgcgcgctcgaggtg
ctcgacgaagagctcgatcgtgtcgcgcgcaccaccgcggaggagctcgcgcccgcgatc
ccgaaggtctgggaggacacgctcgcggcggtgcgccaggacctgcgcgagtggctccac
cgcacgagcgaagatccgagctgggtcccgtcgcgcttcgagctcgcgttcggcatcccc
gcgggcgacgagcgcgacgcggcgagcctccacgagccggtgccgctgtcgatcggcatg
cgcctgcgcggcgcgatcgatctcgtcgaggagcgcgagggcacgctgcgcgcgaccgat
cacaagacgggcagcgcgtggaccaagcccggccagcgcgtgatgggtggcgagaagctc
cagccgatcctctacgcgctcgcgctcgagtcgatcttccccgaccgcacggtgtggggc
ggacgtctctactactgcaccgacaagggccgctacaccgaggtcgaggtcccgctcgac
gacgactcgcgcgctgcgatcacgaaggtgacgaccacgatcgatcagcacgtgcgcgac
gggttcctgccgcctgcgccgagcgagaaggcgtgcagcttctgcgactacgcggtgatc
tgcggcccacacgagcgacgtcgcacgatgcgcaaggaaggtgatcgcctcgtcggcatc
gactcgctgcggaggatgccgtga
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