Sandaracinus amylolyticus: DB32_008272
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Entry
DB32_008272 CDS
T03935
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
samy
Sandaracinus amylolyticus
Pathway
samy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DB32_008272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samy03400
]
DB32_008272
Enzymes [BR:
samy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DB32_008272
DNA repair and recombination proteins [BR:
samy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DB32_008272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
PhoH
AAA_16
AAA_22
SLFN-g3_helicase
CbiA
AAA_28
Pif1_2B_dom
DEAD
UvrD_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AKF11123
UniProt:
A0A0F6W9W8
LinkDB
All DBs
Position
complement(9575379..9577418)
Genome browser
AA seq
679 aa
AA seq
DB search
MTRPPLTPLGAARHAIGAAPAGDLPAFPEDLAALARNADLGEERVHVAWELVRAVPQLAA
EDQRALVVLLVLLFEAIAQGSTRLPISPSDRAVLRARAAALGLSRADLKRAESCADTILV
GLGGKSSDTRGQLSMLFAAPAGARSPYEPLVGEPGAYRPVIVESGALVPQRLSATEGRLA
SRLLDRAPPRAHPDAIATALRAVLASPVVGKRGPIVLTSEQTAAVHAALSEPVAVISGGP
GTGKTSIVVSMLRALARLASPEVAARDVALAAPTGKAADRLASSIRDALAACRDPIDLAL
RDALSEARTLHRLLGWSPSAETFRHDEDSPLAERVVIVDEASMIDLALMERLVAALRPEA
RLVLLGDADQLPSVEPGAVLSDLVGSGGASTITITRLTQSHRMDPRDPAGSHILGIAQAV
NAGTAPRAEEGPLASGVIRRVRAPSDAGEGVSILSPRDAGAREALLSWWYRERVVASVDR
TFVIDAPHDHAPLKALFDRLDASRLLCVTRGRATGADAINAWMGARLARERRLPVGPLLL
VGEPVMVVRNDYDRGLFNGDQGLVLWVAERAGTSARPSLVVRRGERFVAFPLETVRPLLE
RAYATTVHKAQGSEHDAVALVLPDEDVPRLLTREIVYTAITRARRSVLLVGSADLLARAI
ARPTARTTGLGAKLRSRGA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcccgccgctcacgccgctcggcgccgcgcgccatgcgatcggggctgcgccg
gcgggggatctcccggcgttccccgaagatctcgcggcgctcgcgcgcaacgccgatctc
ggcgaggagcgggtgcacgtcgcgtgggagctcgtgcgcgcggtgcctcagctcgctgcc
gaagatcagcgcgcgctcgtggtgctcttggtgctgctgttcgaggcgatcgcgcagggc
tcgacgcgcttgccgatctcgccgagcgatcgcgcggtgctgcgcgcgcgcgccgcggcg
ctcggtctgtcgcgcgccgatctcaagcgcgccgagtcgtgcgccgacacgatcctcgtc
gggctcggcggcaagtcgagcgacacgcgcggtcagctctcgatgctcttcgcggcgccc
gcgggcgcgcgctcgccgtacgagccgctggtcggcgagcccggcgcgtatcgcccggtg
atcgtcgagtcgggcgcgctggtgccgcagcgcctgagcgcgaccgagggacggctcgcg
tcgcgcttgctcgatcgcgcgccgccgcgcgcgcatcccgacgcgatcgcgaccgcgctg
cgcgcggtgctcgcgagcccggtggtcggaaagcgcggtccgatcgtgctcacgagcgag
cagaccgcggcggtgcacgccgcgctctcggagccggtcgcggtgatctcgggtgggccg
ggcaccggcaagacgtcgatcgtggtgtcgatgctccgcgcgctcgcgcgcctcgcgtcg
cccgaggtcgccgcgcgcgacgtcgcgctcgcggcgccgaccggcaaagccgcggatcgc
ttggcgtcgtcgatccgcgacgcgctcgcggcgtgccgtgatccgatcgatctcgcgctg
cgcgatgcgctctcggaggcgcgcacgctgcatcgcttgctcgggtggtcgccgagcgcg
gagacgttccgccacgacgaggacagcccgctcgcggagcgcgtcgtgatcgtcgacgaa
gcgtcgatgatcgatctcgcgctgatggagcgcctcgtcgcggcgctgcgcccggaggcg
cggctcgtgctgctcggggacgcggatcagctgccctcggtcgagcccggcgcggtgctg
agcgatctcgtgggcagcggcggcgcgagcacgatcacgatcacgcggctgacccagagc
caccgcatggatccgcgcgatcccgcgggctcgcacatcctgggcatcgcgcaggcggtg
aacgcggggaccgcgccgcgcgccgaggaaggcccgctcgcgagcggcgtgatccggcgg
gtgcgcgcgccgagcgatgcgggcgagggcgtctcgatcctctcgccgcgcgatgccggc
gcgcgcgaggcgctgctctcgtggtggtaccgcgagcgcgtggtcgcgtcggtcgatcgc
accttcgtgatcgacgcgccccacgatcacgcgccgctcaaggcgctcttcgatcgcctc
gatgcgtcgcgcctgctctgcgtgacgcgtggtcgcgcgaccggcgccgacgcgatcaac
gcgtggatgggcgcgcgcctcgcgcgcgagcgacgcctgcccgtcggtccgctgctgctg
gtgggcgagccggtgatggtcgtgcgcaacgactacgaccgcggcctcttcaacggcgat
cagggcctcgtgttgtgggtcgcggagcgagcaggcacgagcgcgcggccgtcgctcgtg
gtgcgtcgcggcgagcgcttcgtcgcgttcccgctcgagacggtgcgcccgctgctcgag
cgcgcgtacgcgacgacggtgcacaaggcgcagggctcggagcacgacgccgtcgcgctg
gtcctgcccgacgaagacgtgccgcgcctgctgacgcgcgagatcgtctacaccgcgatc
acacgcgcgcgacgctcggtgctgctcgtcggatcggcggatctgctggcgcgcgccatc
gcgcgaccgactgcccgaacgaccgggctcggtgcgaagcttcgttcgcgcggtgcgtga
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