Streptococcus agalactiae NEM316 (serotype III): gbs0890
Help
Entry
gbs0890 CDS
T00104
Name
(GenBank) unknown
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
san
Streptococcus agalactiae NEM316 (serotype III)
Brite
KEGG Orthology (KO) [BR:
san00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
san03400
]
gbs0890
Enzymes [BR:
san01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
gbs0890
DNA repair and recombination proteins [BR:
san03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
gbs0890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
DosC_2nd
Phage_integr_3
rva_4
Motif
Other DBs
NCBI-ProteinID:
CAD46534
UniProt:
Q8E5U0
LinkDB
All DBs
Position
917768..921001
Genome browser
AA seq
1077 aa
AA seq
DB search
MKLLYTDINHDMTEILVNQAAHAAEAGWRIFYIAPNSLSFEKERAVLENLPQEASFAITI
TRFAQLARYFTLNQPNQKESLNDIGLAMIFYRALASFEDGQLKVFGRLKQDASFISQLVD
LYKELQTANLSILDLKYLHSPEKFEDLLAIFLVVSDLLREGEYDNQSKIAFFTEQVRSGQ
LDVDLKNTILIVDGFTRFSAEEEALIKSLSSRCQEIIIGAYASQKAYKANFTNGNIYSAG
VDFLRYLATTFQTKPEFILSKWESKSGFEMISKNIEGKHDFTNSSHILDDTAKDCITIWE
CINQKDEVEHVARAIRQKLYQGYRYKDILVLLGDVDSYKLQLSKIFEQYDIPYYFGKAET
MAAHPLVHFMDSLSRIKRYRFRAEDVLNLFKTGIYGEISQDDLDYFEAYISYADIKGPKK
FFTDFVVGAKKFDLGRLNTIRQSLLAPLESFVKTKKQDGIKTLNQFMFFLTQVGLSDNLS
RLVGQMSENEQEKHQEVWKTFTDILEQFQTIFGQEKLNLDEFLSLLNSGMMQAEYRMVPA
TVDVVTVKSYDLVEPHSNQFVYALGMTQSHFPKIAQNKSLISDIERQLINDANDTDGHFD
IMTRENLKKNHFAALSLFNAAKQALVLTIPQLLNESEDQMSPYLIELRDIGVPFNHKGRQ
SLKEEADNIGNYKALLSRVVDLYRSAIDKEMTKEEQTFWSVAVRYLRRQLTSKGIEIPII
TDSLDTVTVSSDVMTRRFPEDDPLKLSSSALTTFYNNQYKYFLQYVLGLEEQDSIHPDMR
HHGTYLHRVFEILMKNQGIESFEEKLNSAINKTNQEDVFKSLYSEDAESRYSLEILEDIA
RATATILRQDSQMTVESEEERFELMIDNTIKINGIIDRIDRLSDGSLGVVDYKSSAQKFD
IQKFYNGLSPQLVTYIDAISRDKEVEQKPPIFGAMYLHMQEPKQDLSKIKNLDDLVTKNH
QALTYKGLFSEAEKEFLANGKYHLKDSLYSEAEIAILQAHNQLLYKKASETIKSGKFLIN
PYTEDAKTVDGDQFKSITGFEADRHMARARALYKLPAKEKRQGFLTLMQQEEENDDL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatactgatattaatcatgatatgacagaaatcttagtcaatcaggcc
gcgcatgctgctgaagctggatggcgtattttttatattgctccaaactctttatctttt
gaaaaagagcgtgcagtattagagaaccttcctcaagaagcctcttttgctattacaatt
actcgctttgctcaattggcacgttattttactttaaaccagcctaatcaaaaagaaagt
ttaaacgatattggattagcaatgatcttttatcgtgctttagcaagttttgaagatgga
caattaaaagtttttggacgattgaagcaagatgcttcctttatcagtcaattggtagac
ctatacaaagaattgcagacagcaaatctgagtattttagatttaaaatatttacattct
cctgaaaaatttgaagatttattagctatttttctagtggtttcagatcttttaagagaa
ggagaatacgacaatcaatctaaaattgccttttttacagaacaagtaaggtcaggccag
ctagatgtggatttaaagaacactatccttatagtcgatggttttacccgtttctcagct
gaagaagaagctttaattaaaagtctgagttcacgttgtcaagagattatcatcggagct
tatgctagccaaaaagcgtataaggctaactttactaatggaaatatttattctgcaggg
gttgattttttaagatatctagcaacgacatttcaaacaaaaccagaatttatcttgtct
aagtgggaaagtaagtctggttttgaaatgatttcgaaaaatatcgaaggtaaacatgat
tttacaaatagtagtcacattttagacgacactgctaaagattgtataacaatttgggag
tgcattaatcaaaaagatgaagtggaacatgtggctagagctatacgtcagaaactttat
cagggatatcgctacaaagatattttagttttactaggagatgtagatagttataaacta
caattaagcaagatttttgagcagtatgatattccttattatttcggtaaagctgaaaca
atggctgcgcaccctttagttcattttatggattccttgtctcgaataaaacgttatcga
tttagagctgaagatgttttaaatctttttaagacaggtatttatggagagattagtcaa
gatgatttagattattttgaggcttatatctcatatgcagacattaaaggtcctaagaag
ttctttacagattttgttgtgggggctaaaaaatttgatttagggcgtcttaacactatt
cgtcagtccctccttgctccactggaaagttttgttaaaacgaaaaaacaagacggtata
aaaacactcaaccaattcatgtttttccttactcaggtaggtttgagtgacaatttatcg
cgattagttggtcaaatgtctgaaaatgaacaagaaaaacatcaagaagtttggaaaaca
tttacagatattttagagcagtttcaaacaatatttggtcaagaaaaattaaatttagat
gaatttttatcgttattaaattcaggtatgatgcaagccgagtatcgtatggtccctgct
actgttgatgtggttactgttaagtcttacgacttggtagaaccacatagtaatcaattt
gtctatgccctaggcatgacacaatcacattttccaaagattgctcaaaacaaatcttta
atatctgatattgaacgtcagcttataaatgatgccaatgacactgatggtcattttgac
attatgacgcgagaaaatttgaagaaaaaccattttgctgctctctctctttttaatgct
gctaaacaagcattagtgttgactataccacaattattgaatgagtctgaagatcagatg
tcaccatatcttatcgaactaagagatataggtgttccttttaatcataaaggacgccaa
tcgttaaaagaagaagctgataatattgggaattacaaagctttattatcgcgtgttgtt
gacttgtatcgctctgctattgacaaagagatgactaaagaagaacaaactttttggtca
gttgctgttcgttatttgcgtcgtcaattaacttctaaagggattgagataccaataatt
acagatagtcttgatactgtgacagtttcatcagatgtgatgaccagacgcttcccagaa
gatgacccacttaaattatcctcatctgctttgacaactttttataataatcaatataag
tattttttacaatatgtgttaggtttggaagaacaagactcaattcatccagatatgcgg
caccatggaacgtaccttcatcgtgtttttgaaattctgatgaaaaaccaagggatagaa
tcttttgaagagaaactcaactctgcaattaataaaaccaatcaagaagatgttttcaaa
tccttgtattcagaagatgcagaaagtcgttattctttagaaattttagaagatatcgcg
cgtgcaactgcaaccatattacgacaagatagtcagatgactgttgaaagtgaagaagaa
cgatttgaactaatgattgataatactataaaaattaacggtattattgaccgtatcgat
cgtttatctgatggttctttgggtgtcgtggactataaatcaagcgctcaaaaattcgat
atccaaaaattttataacggtctaagtccacaattagttacctacattgatgctatcagt
cgtgacaaggaggttgaacaaaaaccaccgatttttggagctatgtatttacatatgcaa
gaacctaaacaagacttgtctaaaattaaaaatttagatgatttagtaacaaaaaatcat
caagctttaacttataaaggattattttcagaagctgaaaaagaatttttagcaaatggg
aaataccatctcaaagattccctttattcagaggctgaaattgctattttacaagcacat
aaccaattgctttacaaaaaagcatctgagactattaagtcaggtaagtttttgatcaat
ccatatacagaagatgctaaaacagttgacggtgatcagtttaagagtattacggggttc
gaggcggataggcatatggcgcgtgccagagcgctttataaattacctgctaaggaaaaa
cgtcaaggtttcttaacattaatgcagcaagaggaggaaaatgatgacctttaa
DBGET
integrated database retrieval system
