Streptococcus agalactiae NEM316 (serotype III): gbs1040
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Entry
gbs1040 CDS
T00104
Name
(GenBank) Unknown
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
san
Streptococcus agalactiae NEM316 (serotype III)
Brite
KEGG Orthology (KO) [BR:
san00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
san03032
]
gbs1040
03400 DNA repair and recombination proteins [BR:
san03400
]
gbs1040
Enzymes [BR:
san01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
gbs1040
DNA replication proteins [BR:
san03032
]
Prokaryotic type
DNA Topoisomerases
gbs1040
DNA repair and recombination proteins [BR:
san03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
gbs1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAD46699
UniProt:
Q8E5I9
LinkDB
All DBs
Position
complement(1083790..1085910)
Genome browser
AA seq
706 aa
AA seq
DB search
MATTTKTSTKKTNKKKSATAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKKSS
MSIDFENNYEPQYINIRGKGPLINDLKKEAKKAKKVYLASDPDREGEAISWHLAHILDLD
KEDRNRVVFNEITKDAVKNAFVEPRQINMDLVDAQQARRVLDRIVGYSISPILWKKVKKG
LSAGRVQSVALKLIIDRENEIKAFQPEEYWTIDGSFKKGTRKFNATFYGLDGKKFKLSNN
EDVKTVLKRIKTDEFLVEKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMIAQQL
YEGLSLGTAGHQGLITYMRTDSTRISPLAQNEATEFITNRFGANYSKHGNKVKNASGAQD
AHEAIRPSSVNHTPESIAKYLDKDQLKLYTLIWNRFIASQMTAAVFDTMKVNLTQNGVTF
IANGSQVKFDGYMAVYNDTDKNKMLPDMEEGESVKKVNTNPEQHFTQPPARFSEASLIKT
LEENGVGRPSTYAPTLETIQKRYYVKLAAKRFEPTELGEIVNSLIVEFFPDIVDVTFTAE
MEGKLDEVEIGNEQWQKIIDEFYKPFEKELAKAETEMEKIQIKDEPAGFDCELCGSPMVI
KLGRYGKFYACSNFPECHNTKAITKEIGVICPICQKGQVIERKTKRNRIFYGCDRYPECE
FTSWDKPIGRTCPKSNDFLVEKKVRGGGKQVVCSNEKCDYQEEKIK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcaactacgacaaaaacgtcgaccaaaaaaacaaataaaaaaaaatcagctactgct
aaaaaaaatctagttattgtggagtctcctgcaaaagcaaagactatcgaaaaatactta
ggacgtaactataaagttgtagcctcagtaggtcatatccgtgatttaaaaaagtcaagt
atgtccattgattttgagaataattacgaaccacaatatattaatattcgtggtaaagga
cctctcattaatgatttaaaaaaagaagctaaaaaggctaaaaaagtttacctcgcgagt
gacccggaccgtgaaggagaagctatttcctggcatttagcgcatattttagatttagac
aaagaagacagaaaccgtgttgttttcaatgaaatcacaaaagatgctgttaaaaatgct
tttgtggaacctcgtcagattaacatggatctcgttgatgctcagcaagcacgacgtgtt
ttagatcgcattgttggttattctatctcacctattttatggaaaaaagtaaaaaaaggg
ctatcagctggacgtgtacaatcagttgctcttaaactaatcattgatcgtgaaaatgag
attaaggctttccaaccggaggagtattggactattgacggttcctttaaaaaaggaaca
cgtaaattcaatgccactttctacggtttagacggaaagaaattcaaattatcgaataat
gaagacgtcaaaacagttctaaaacgtattaaaactgatgaattcttagttgaaaaagtt
gaaaaaaaagagcgtcgtcgtaatgcaccattaccgtatacaacttcttcattgcaacaa
gatgcagctaataaaatcaattttcgaactcgtaaaaccatgatgattgcgcaacagctg
tacgaaggacttagcttaggcacagcaggtcatcaaggtctgattacctatatgcgtact
gattctacacgtattagtccgttagcacaaaatgaagcaacagaatttattactaaccgt
tttggtgcaaattattctaaacatgggaataaagttaaaaatgcttctggagcacaagac
gctcacgaagctattcgcccatctagtgttaatcatacacccgaaagtattgctaagtat
ttagacaaagatcaactaaaactttacactcttatctggaaccgttttattgcaagccaa
atgacagcagcagtctttgacacaatgaaagttaatttaacgcaaaatggtgttactttt
attgctaatggtagccaagtcaagtttgatggttacatggctgtttataacgatactgac
aaaaataaaatgttaccagatatggaggaaggagaaagtgttaaaaaggttaatacgaat
cctgaacaacacttcactcaacctcctgcaaggttttcagaagcaagtctcattaaaaca
cttgaagaaaacggtgtaggtcgtccttcaacttatgccccaacgcttgagactattcaa
aaacgttattatgttaagcttgcagctaaacgcttcgaaccaactgaacttggtgaaatt
gttaatagccttattgtagaatttttcccagatattgttgatgttaccttcactgccgaa
atggaagggaaactagacgaagttgagattggtaatgagcagtggcaaaagattatcgat
gaattttataaaccatttgaaaaagaacttgcaaaagcagaaactgaaatggagaaaatt
caaataaaggatgaacctgctggatttgattgcgagctatgtggatcaccaatggtaata
aaactaggacgttatggaaagttttatgcgtgtagcaatttccctgaatgtcataacaca
aaagctatcactaaggaaataggtgttatttgtcctatctgtcaaaaaggacaagttatt
gagcgaaaaacaaaacgcaatcgtatcttttatggctgtgaccgctacccagaatgtgag
tttacatcttgggacaaacctattggacgaacttgccccaaatcaaatgatttcttagtg
gagaaaaaagtacgcggtggtggtaaacaagttgtttgctcaaatgaaaaatgcgactac
caagaagagaaaattaaataa
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