Streptococcus agalactiae NEM316 (serotype III): gbs1209
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Entry
gbs1209 CDS
T00104
Name
(GenBank) Unknown
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
san
Streptococcus agalactiae NEM316 (serotype III)
Pathway
san03420
Nucleotide excision repair
san03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
san00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
gbs1209
03430 Mismatch repair
gbs1209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
san03400
]
gbs1209
Enzymes [BR:
san01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
gbs1209
DNA repair and recombination proteins [BR:
san03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
gbs1209
MMR (mismatch excision repair)
Other MMR factors
gbs1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAD46868
UniProt:
Q8E525
LinkDB
All DBs
Position
complement(1246103..1248382)
Genome browser
AA seq
759 aa
AA seq
DB search
MNPLIIGMNDKQAEAVQTTDGPLLIMAGAGSGKTRVLTHRIAYLIDEKYVNPWNILAITF
TNKAAREMRERAIALNPATQDTLIATFHSMCVRILRREADYIGYNRNFTIVDPGEQRTLM
KRIIKQLNLDTKKWNERSILGTISNAKNDLLDEIAYEKQAGDMYTQVIAKCYKAYQEELR
RSEAMDFDDLIMMTLRLFDQNKDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKKILQAANNVINHNKN
RRPKKLWTQNDEGEQIVYHRANNEQEEAVFVASTIDNIVREQGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVIAYLNILANTSDNISFERIVNEPKRGVGPG
TLEKIRSFAYEQNMSLLDASSNVMMSPLKGKAAQAVWDLANLILTLRSKLDSLTVTEITE
NLLDKTGYLEALQVQNTLESQARIENIEEFLSVTKNFDDNPEITVEGETGLDRLSRFLND
LALIADTDDSATETAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRAIEDADELEEERR
LAYVGITRAEQILFLTNANTRTLFGKTSYNRPTRFIREIDDELIQHQGLARPVNSSFGVK
YSKEQPTQFGQGMSLQQALQARKSNSQPQVTAQLQALNANNSHETSWEIGDVATHKKWGD
GTVLEVSGSGKTQELKINFPGIGLKKLLASVAPISKKEN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttaataattggaatgaatgataaacaagcagaagcggtacaaacgacagac
ggaccgcttttgattatggcaggagctggctctggaaaaacacgtgttctgactcatcgt
attgcttatttaatagatgaaaaatatgttaatccttggaatattttagcgattactttt
actaataaagcagcgcgtgaaatgcgtgaacgtgctatcgccttgaatccagctacccaa
gatactttgattgcaacttttcatagtatgtgtgttcgtattttacgtcgtgaagctgat
tatattggatataatcgtaactttacaatcgttgatccaggtgagcagcgtactttaatg
aagcgaatcattaagcaattaaatttggacacaaaaaagtggaatgaacgttcaatttta
ggtacaatctctaatgctaaaaatgaccttcttgatgaaattgcatatgagaagcaagcc
ggagatatgtatacacaggtaattgctaaatgctataaagcttatcaagaggaattacgt
agaagtgaggccatggatttcgatgacttgattatgatgacacttcgattatttgatcag
aataaagatgttttggcctattaccaacagaggtatcaatatatccatgtagacgagtat
caagatactaaccacgctcaataccaattagttaagttattagcttcgcgtttcaaaaat
atttgtgttgttggtgatgccgatcaatccatttacggatggcgtggagctgatatgcaa
aatattcttgattttgaaaaggactatccgcaagccaaagttgtattattagaagaaaat
tatcgatcgactaagaaaatacttcaagctgctaataatgtgattaatcataataaaaat
cgccgtcccaaaaaattatggactcaaaatgatgaaggtgagcaaattgtatatcataga
gctaacaatgagcaagaagaagccgtttttgtagcatcaactattgataacatcgttcga
gaacaaggaaaaaatttcaaagattttgccgttctttatcgtacgaatgcgcaatctcgt
actattgaggaagcacttttaaaatccaatattccatatacaatggttggtggaacaaaa
ttctatagtcgtaaagaaattcgagatgttattgcttatctcaatatccttgcaaatact
tctgataatatttcttttgagcggattgtaaatgaacctaaaagaggggttgggccaggc
actttagaaaaaatacggtcatttgcctatgaacagaacatgtctcttcttgatgcctct
tcaaatgtcatgatgtcgcccttaaaagggaaggctgctcaagctgtttgggatttagct
aatctgattttgactctacgtagtaagctagatagtttaactgtaacggagattacagaa
aacctactggataagacaggatatctagaagcacttcaagttcaaaatacattagaaagt
caagcgcgtattgaaaatattgaagaattcttgtcagtgactaaaaattttgacgataac
cctgagattacagtagagggtgaaactggtttagatcgtctatcgcgttttttaaatgat
ttagctttaatagcagatactgatgatagcgccactgaaacggctgaggtcactttaatg
acattacatgctgccaagggtctagaatttccagttgttttcttaatcggtatggaagaa
ggagtatttcctttatcgcgtgcaatagaggatgctgatgaattagaagaagagcgtcgt
ttagcttatgtcgggattacgagagcagaacaaatacttttccttaccaatgctaatacc
cgtactttatttggtaaaactagttataatagaccaacccgttttatacgtgagattgat
gatgagctgatacaacatcaagggttggctcgaccagttaattcttcatttggtgtgaaa
tattcaaaagaacagcctacacaatttggtcaaggaatgagtcttcaacaagcgcttcag
gcacgtaaaagtaattcacaacctcaagtaactgcccaactccaggctcttaacgcgaac
aatagccatgagacatcatgggagattggtgatgttgcaactcataaaaaatggggggac
ggtacggtgcttgaagtttcaggtagcggaaagactcaagagttaaaaataaattttcca
ggtattgggttaaagaaattattagcgagtgtcgctcctattagtaaaaaggaaaactaa
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integrated database retrieval system
