Streptococcus agalactiae NEM316 (serotype III): gbs1312
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Entry
gbs1312 CDS
T00104
Name
(GenBank) Unknown
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
san
Streptococcus agalactiae NEM316 (serotype III)
Pathway
san03030
DNA replication
san03430
Mismatch repair
san03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
san00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
gbs1312
03430 Mismatch repair
gbs1312
03440 Homologous recombination
gbs1312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
san03032
]
gbs1312
03400 DNA repair and recombination proteins [BR:
san03400
]
gbs1312
Enzymes [BR:
san01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
gbs1312
DNA replication proteins [BR:
san03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
gbs1312
DNA repair and recombination proteins [BR:
san03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
gbs1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
I-HmuI_NUMOD-like
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
CAD46971
UniProt:
Q8E4T7
LinkDB
All DBs
Position
complement(1358178..1359992)
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AA seq
604 aa
AA seq
DB search
MSFFEKLFSKFNKKTTSDIVQFNNNSHINPFGFVDSQQMDINDNNINFIKNRFIAFDIET
PGLNSQQDRIVEVGAVLFENGKVVDSYESLVNAKVNISADVTRLNNITNRMIKNAPSENQ
VYYELVNFLGDALNGKTPVCAHNAKFDMGFLCNTLSRLGYNGEIKYLDTLSLSRKNVKGL
RNYKQNTVAEYFNLQNKNSHRAKSDAIICGNILTKLFFIIENQKSRKSFSSKNNKISPEE
LEVCAVIQNIIFERKGDTDLVGYYKNSSGYIDVYYLYKIVRFKFTKKGKYIIVPRDLKGS
ENFILESCTLSEGGHDFVRLYFNSPLEVKEISSYIFEEYINTKRSATEYLNYNKNYVDEY
KASPLMENVLSNTDVKNILVSINNKVYNSQNNIIEKDLIDRKDIKINPVNNRIPVSEIQN
LTNWHKGFDLGFPFWEEGEKYRKEGNLKRSILLYDLARSNGYCSPALFESYAMAFHRLKD
YENEIDILDEGIEREGNLGRLITRRNNAMKMLIKSRNEQKKIKENESAENILFSEIEILK
RKKTRKNARPVLKMDDEMNILEHFESISDAVKKTGINSKSIRDASKGIQKHAGGFVWRYE
DEYK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttgaaaaattatttagcaagtttaataaaaagacaactagtgatattgtt
caattcaataataattctcatattaatccatttggttttgtagattcccaacaaatggat
attaatgacaataatataaactttataaaaaatagatttattgcttttgatatagaaacg
ccaggtttaaactcacagcaagatagaattgttgaagtaggtgcagttctttttgaaaat
ggtaaagtcgttgattcatatgaatcattagtaaatgctaaagttaacatttcagcagat
gtaactcgacttaataacattacaaatcgtatgattaagaatgctccatctgaaaatcaa
gtatattatgaattagtaaattttttgggtgatgcattaaatggtaaaacaccggtttgt
gcacataatgctaaatttgatatgggatttttatgtaatacactaagtagacttggatat
aatggagaaattaagtatttggatactctatccctttcaagaaaaaatgtaaaagggttg
aggaattataaacaaaatacagttgctgaatattttaatctacagaataaaaattctcat
agagctaaaagtgatgcaatcatttgtggtaatatattaacaaaattattttttattatt
gaaaaccaaaaatcaagaaaaagtttttcttctaaaaacaacaaaatttctccagaggaa
cttgaggtttgtgcagttatacaaaatattatttttgaaagaaaaggtgatactgattta
gtgggatattataaaaatagtagtggttatattgatgtgtactatttatacaagattgta
aggtttaaatttactaaaaaaggtaagtatattatcgtacctagagatttgaaaggttct
gaaaattttattctagagtcttgtactttatcagaaggtggtcatgattttgttagacta
tactttaattctccacttgaagtgaaagaaatttctagttatatttttgaagaatatata
aatactaaaagatctgcaactgagtatttaaattataataaaaactatgttgatgaatat
aaggcaagtcctcttatggaaaatgtactttcaaacactgatgtaaaaaatattttagtt
agtataaataataaagtttataactcacaaaataatattattgagaaagatcttattgac
agaaaagatataaaaattaatcctgttaataatcgaattcctgtttcagaaatacaaaat
ttgactaattggcataaaggatttgatttgggttttccattctgggaagaaggggaaaaa
tatagaaaagaaggaaatttaaaacgatcaattttgttatatgatttagctagatctaat
ggctattgttcgcccgcactttttgagtcatatgcaatggcttttcatagattaaaagac
tatgaaaatgaaattgatatcttagatgaaggaatagagcgtgagggcaatttaggtaga
ttaattacacgtagaaataatgcgatgaaaatgttaatcaaatcaagaaacgaacaaaag
aaaataaaagaaaatgaaagtgctgaaaacatcctttttagtgaaatagagattttaaaa
agaaaaaaaactagaaaaaatgcacgtccagtcttgaaaatggacgatgaaatgaatata
ttagaacattttgagtctatttcagatgcagtaaaaaaaacaggaattaattcaaaaagt
atacgtgatgcttcaaaaggtattcaaaagcatgcaggtggttttgtctggagatacgag
gacgaatataagtag
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