Streptococcus anginosus C238: SANR_0389
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Entry
SANR_0389 CDS
T02829
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sanc
Streptococcus anginosus C238
Brite
KEGG Orthology (KO) [BR:
sanc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanc03019
]
SANR_0389
03009 Ribosome biogenesis [BR:
sanc03009
]
SANR_0389
Enzymes [BR:
sanc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SANR_0389
Messenger RNA biogenesis [BR:
sanc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SANR_0389
Ribosome biogenesis [BR:
sanc03009
]
Prokaryotic type
rRNA helicases
SANR_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AGU82869
LinkDB
All DBs
Position
381304..382647
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AA seq
447 aa
AA seq
DB search
MKFTEFKFKDYIQEALKDLNFVEATEVQEKLIPVVLAGRDLVGESKTGSGKTHTFLLPIF
QKLDEGTDSVQVVITAPSRELARQIYQAARQIAAFSDKEIRVANYVGGTDKNRQIGKLSS
SQPHIVIGTPGRIYDLVESGDLAIHKANTFVVDEADMTLDMGFLETVDKIASSLPKDLQF
LVFSATIPQKLQPFLKKYLSNPVIEQIKTKTVISDTIENWLISTKGRDKNAQIYEITQLL
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVKNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GIHFIPKMIKNGEFQDTYDRDRRANREKTQEKLDTEMIGLVKKRKKKIKPGYKKKIQWAV
NEKRRKTKRAKNRTRGRAERKAKRQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagaatttaagtttaaagattacattcaagaggcactcaaggatttgaac
tttgttgaggcgacagaagtccaggagaaactcattccggttgtgcttgctggtcgtgac
ttggtgggagagtccaaaacaggttcagggaaaacacacactttcttactgccgattttt
caaaaactagatgaaggcacagatagtgttcaggtcgttattacagctcctagtcgtgag
ttggctaggcagatttatcaggctgcacgccaaattgctgctttttctgataaggaaatt
cgagttgctaactatgtcggtggaactgataaaaatcgtcagattgggaaattgagttcc
agtcaaccacatattgtcattggcacaccaggacgcatttatgatttggtcgaatcaggt
gacttagccattcataaggcgaatacctttgtagtagatgaagcagatatgaccttggat
atgggctttttagaaacagtggataagattgcgtccagtttgccgaaggatttgcaattt
ctggtcttctctgcgaccattccgcaaaaattgcagccatttttaaaaaaatatctatct
aacccggtcattgagcaaatcaaaaccaaaacggttatttcagataccattgaaaattgg
ctgatttcaacaaaaggacgtgataagaatgcgcagatttatgaaatcacacagctccta
cagccttatctagctatgatttttgtcaatactaagacacgagcggatgaattgcatagc
tatttgacagcgcaaggtctcaaggtggcaaagattcatggggatattgcaccgcgggag
cgaaaacggattatgaatcaggtgaagaacctagattttgaatacattgttgcgacagat
ttagctgcgcggggaattgatattgaaggcgttagtcatgtcatcaatgatgcgattccg
caagatttgtccttcttcgttcaccgagtgggacgaactggcagaaatggtctatcggga
acagccattacactttatcaaccgagcgatgattcagatattcgtgagctggaaaaattg
ggcattcacttcattcccaagatgattaaaaacggagaatttcaagatacctatgaccgc
gatcgtcgtgccaatcgtgaaaaaacgcaggaaaaattggacacggaaatgattggtctg
gttaaaaagagaaagaagaaaatcaaaccgggctataagaaaaaaatccagtgggctgtc
aatgaaaaacgccgaaaaacgaagcgagctaaaaatcgcacacgcggtcgtgcagaaaga
aaagcgaaacgtcaaagtttttag
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