Streptococcus anginosus C238: SANR_0407
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Entry
SANR_0407 CDS
T02829
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sanc
Streptococcus anginosus C238
Pathway
sanc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SANR_0407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanc03019
]
SANR_0407
Messenger RNA biogenesis [BR:
sanc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SANR_0407
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
LMBR1
MetOD1
Motif
Other DBs
NCBI-ProteinID:
AGU82887
LinkDB
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Position
401573..403180
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AA seq
535 aa
AA seq
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MEMIFAGVFAVIIGLVIGYVSITVRMKSAKEAAELTLLNAEQEATNLRGQAEREADLLLK
EVKRESKSLKKEALLEAKEEARKYREEVEAEFKSDRQELKQLESRLTERATSLDRKDDNL
TNKEKTLEQKEQSISDRNKNLEARENKLTELEQHKEAELERVASLSQTEARDIILTQTED
KLSKEIATRIREAEQEVKERSDKVAKDILVQAMQRIAGDYVAEQTNSTVHLPDDTMKGRI
IGREGRNIRTFESLTGIDVIIDDTPEVVTLSGFDPIRREIARMTMEALLKDGRIHPARIE
ELVEKNRLEIDHKIREYGEVAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSVEVAK
LSGVIASELGENANLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPIVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKNSFALQ
AGREIRIMVNPGQIKDDKITILAHDVREKIENNLEYPGNIKVTVIREMRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatttttgcaggtgtttttgccgtcatcattggtttagtcattggatatgta
agtatcacagttcgcatgaaatctgcgaaagaagctgcggaacttactcttttaaatgct
gaacaagaagcaactaatttacgtggacaagctgagcgcgaagcggatttgttattaaaa
gaagtgaagcgcgaaagtaaatcccttaaaaaagaagcactgttagaggcaaaagaagaa
gccagaaaatatcgagaagaagttgaggcagaatttaaatctgatcgtcaagaattgaag
caattggaaagtcgtttgacagaacgtgcgacaagtcttgatcgtaaagatgacaatttg
accaacaaagaaaaaacactcgaacagaaagaacaaagtatttctgatagaaacaaaaac
cttgaggcgcgtgaaaacaaactgacagagttggagcaacataaagaagcagaattagag
cgtgttgcttcactttcacaaactgaagccagagatatcattctcactcagactgaggat
aagttatcaaaggaaattgcgacgcgtattcgtgaagcagagcaagaggtcaaagaacgt
tctgataaggtggcaaaggatattttagtccaagccatgcaacggattgcaggtgactat
gttgcggagcaaaccaattcaacagttcatctgccggatgatacgatgaaaggtcgcatt
attggacgtgaaggtcggaatattcgaacctttgaaagtttaacgggtattgatgtcatt
attgatgacacaccagaagtggtgactttatctggttttgatcctattcgacgtgaaatt
gcacgcatgacaatggaagccctgctgaaagacggtcgtatccacccagctcgcattgaa
gaattagtagagaaaaatcgtctggaaattgaccataagattcgtgaatatggtgaagta
gcggcttatgaaatcggtgcaccaaacttacatccggatttgatgaagattatgggacgc
ttgcaattccgtacgtcatatgggcaaaatgtattgcgtcattctgttgaagttgctaag
ttgtctggtgtcattgcaagtgaactcggtgaaaatgctaacttagctcgccgtgcaggc
ttccttcacgatattggaaaggctattgaccgtgaagtggaaggtagccatgtggaaatt
ggaacagaattggctcgtaagtataaggaacatccaattgtggtcaatacaattgccagt
catcatggtgatgtagaacctgaaagtgtgattgcagttattgttgcagcagctgatgcg
cttagtgcggctcgtccaggtgctcgtagcgaatcccttgaaagctatatcaagcgcctg
caagatttggaagaaattgccaatagctttgagggcgtgaaaaatagttttgctttacaa
gcaggtcgtgagattcggattatggtcaatcctggtcaaatcaaagacgataaaattact
attttggctcatgatgtgcgtgaaaagattgagaacaaccttgaatatccaggaaatatc
aaagtaacggttattcgggaaatgcgtgctgtggattatgcgaaatag
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