Streptococcus anginosus C238: SANR_1501
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Entry
SANR_1501 CDS
T02829
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sanc
Streptococcus anginosus C238
Pathway
sanc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sanc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SANR_1501 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sanc03019
]
SANR_1501 (deaD)
03009 Ribosome biogenesis [BR:
sanc03009
]
SANR_1501 (deaD)
Enzymes [BR:
sanc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SANR_1501 (deaD)
Messenger RNA biogenesis [BR:
sanc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SANR_1501 (deaD)
Ribosome biogenesis [BR:
sanc03009
]
Prokaryotic type
rRNA helicases
SANR_1501 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGU83936
LinkDB
All DBs
Position
complement(1597199..1598896)
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AA seq
565 aa
AA seq
DB search
MHFPHAYGVEVKNKTYLFIILCVILDRLQITMFYKVASHCLFRKKKKLKFNELHLSAELL
AEIDKAGFVEASPIQEQTIPLAMAGKDVIGQAQTGTGKTAAFGFPTLEKINTENPVVQAL
VIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALRSGAHIVVGTPGRLLDL
IKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLFSATMPDAIKQIGV
KFMKEPTHVKIAAKELTTELVDQYYIRVKENEKFDTMTRLMDVEQPELSIVFGRTKRRVD
ELTRGLKIRGFRAEGIHGDLDQGKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYN
YDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIESLTKKRMKGMKPATAEEA
FQAKKKVALKKIERDFADENIRNQFEKFGKDARKLATEFTPEELALYILTLTVQDPDTLP
EVEIAREKPLPFKYVSGANKGNRNSKNGRRSNDRRDRTNGRDNYKKSGRHDRFDKEKRYR
KDHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcctcatgcgtacggcgtggaagtaaaaaataaaacctatctttttatcatt
ctttgtgttatactagataggttgcaaataactatgttttataaggtagcttcgcactgc
ctttttagaaagaagaaaaaattgaaatttaatgaattacatttatctgctgaattgtta
gcagaaattgacaaagcgggctttgtggaagccagcccaatccaagaacaaacaatcccg
ctggctatggcaggaaaagatgtgattggacaagctcagactggtacaggaaagacagcc
gcttttggttttccgactcttgaaaaaattaacacagaaaatcctgttgttcaggcttta
gtcattgcaccaactcgtgaattggctgttcaaagtcaagaggaactcttccgctttggt
cgaagcaaaggtgtgaaagtccgttctgtttatggcggatccagcattgaaaagcaaatc
aaggctctccgttcaggcgcgcacattgttgttggaactccaggacgtttattagacctc
attaagcgcaaagcactgaaactcaatcatgtagaaacgcttattttagacgaagcggat
gaaatgctcaatatgggtttcttagaagacattgaagcaatcatctcacgtgtgccggaa
gagcgtcagacccttctcttttcagctactatgccagatgctatcaagcagattggcgtg
aagtttatgaaagagccaacacatgtcaaaattgcagcaaaagaattgacaacggagttg
gtggatcaatattatatccgtgtaaaagaaaatgaaaaatttgataccatgacacgtctc
atggatgtggaacaaccagaactttctatcgtttttgggcgtaccaaacgccgagttgat
gaattgactcgtggacttaaaatccgtggtttccgtgcagaggggattcatggcgattta
gaccaaggaaaacgtctccgtgttcttcgcgactttaaaaacggaaatttagatgttctt
gttgcgacggacgttgctgcgcgtggtttggatatttctggtgttacacatgtttacaat
tatgacattccacaagacccagaaagttatgtacaccgtattgggcggacaggtcgtgct
ggaaaatctggtcagtccattacatttgttgcaccaaatgaaatgggttatcttcaaatc
attgaaagtttgaccaaaaaacgtatgaaaggcatgaaaccagccactgcagaagaagcc
tttcaagctaagaaaaaagttgcacttaaaaagattgagcgagattttgcggatgaaaac
attcgcaaccaatttgaaaagtttggcaaagacgctcgcaagttggcaactgaatttaca
ccagaagaattggctttatatatattgaccttaaccgtacaagatccagacactctacca
gaagtagaaatcgcgcgtgaaaagccattaccatttaagtatgtttcgggagctaataaa
ggcaatcgtaatagcaaaaatgggcgtcgtagtaatgatcgtcgtgaccgtactaatggg
cgtgacaattacaaaaagagtggtcgccacgatcgctttgacaaagaaaagcgttaccgc
aaagatcacaaaaaacctcgcaatacttcaagtgagaagaaaacaggatttgtcatccgt
aataaaggtgataagtaa
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