KEGG   Sandaracinobacteroides saxicola: H3309_00535
Entry
H3309_00535       CDS       T06739                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sand  Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:sand00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sand03016]
    H3309_00535 (truB)
Enzymes [BR:sand01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     H3309_00535 (truB)
Transfer RNA biogenesis [BR:sand03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    H3309_00535 (truB)
 Prokaryotic type
    H3309_00535 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: QMW23038
UniProt: A0A7G5II46
LinkDB
Position
112601..113509
AA seq 302 aa
MPHGWLVIDKPLGLTSAQVVGRLKHAMRGSYGKVKIGHGGTLDPLATGVLPVALGEATKL
AGHLLNGRKGYAFTVAFGVATATDDAKGAVTATSAVRPDEATLRAVLPQFTGPIRQRPPA
YSALKVDGERAYARARAGEDVVLAERAVTIDALTLEAVTADSATFVVTCSKGTYVRSLAR
DIALAAGTVGHVSMLRRTEAGRFGLAQAIVLDRAVALCHGAALGQALLPLSAGLDDIPVL
VLEPHEATLLKSGRRLPGPRAKPGTYLATLGSVPVALVAVSALDVRVERGFNLEGDPDVG
HC
NT seq 909 nt   +upstreamnt  +downstreamnt
atgccgcacggctggctggtgattgacaagccgttggggctgacctccgcgcaggtggtg
gggcggttgaagcatgccatgcgtggcagttatggcaaggtgaagatcgggcatggcggg
acgctggatccgctggcgacgggggtgttgccggtggcgctgggggaggcgaccaagctg
gcgggccatctgctgaacggcagaaagggctatgcgttcaccgtggcgttcggggtggcg
acggcgaccgacgatgccaaaggggcggtgacggcgacgagcgcggtgcggcccgacgag
gcgacgctgcgggcggtgctgccgcaattcaccggcccgatccgccagcggccgccggcc
tattccgcgctgaaggtggatggcgagcgggcctatgcgcgggcgcgggcgggggaggat
gtggtgctggccgagcgggcggtgacgatagatgcactgacgctggaggcggtgacggcg
gacagcgcgacgtttgtggtgacgtgcagcaagggcacctatgtgcgcagcctggcgcgg
gacatcgcgctggccgctggcacggtcggccatgtctccatgctgcggcgcacggaggcc
gggcggttcgggctggcacaggcgattgtgctggacagggcggtcgctctctgtcatggg
gccgcgcttggacaggcccttttgccgctgagtgccggactggacgacatcccggtcctg
gtgctcgaaccccacgaggcgacgctgctgaaaagcggccggcgcttgccggggccccgc
gcgaaacccggcacctatctcgccaccctcgggtctgttccggtggcgctggtggcggtt
tccgcactcgacgtgcgcgttgagcggggattcaatctggaaggagaccccgatgtcggt
cactgctga

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