Sandaracinobacteroides saxicola: H3309_01200
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Entry
H3309_01200 CDS
T06739
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_01200 (addB)
Enzymes [BR:
sand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3309_01200 (addB)
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
H3309_01200 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QMW23157
UniProt:
A0A7G5IIG5
LinkDB
All DBs
Position
247757..250708
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AA seq
983 aa
AA seq
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MPRPERVALYTIPAERPFVDDLAAGLLATAADAMALARTLVLLPSRRSVRALTEAFVRQS
GARALLLPRLAAVGDLDADEALGTFAEGLEEAPELLPEMPALERQLLLAALLSDGGPAAR
FALAGQLGAVLDTLTIEGRRPAELAEIDAGGLSDHWAKNLKVLETVWRRWPAVLKAMGRQ
DAVDRRNRLLRMLARRWRRAGPGHAVVMAGFAQAAPAVAELAGAVARMAGGTVVLPGLDL
ALDAAGWAAIAGGEEARPADTHPQAGLARLLAAMGVAAEEVQPWPHRSDAAGSAAARRAL
VAAALAPVRLAVRPAVAEAAALAGVQWLEAATPAEEAAAIALALRQVVAVPGKTAALVTP
DRELARRVRVALSGYGIAVDDSAGERVAATPPGALLVALASAVAEDFAPVALLGLLKHPL
VMQGGGRLDWLEQVRTLDRLVLRGLRPAPGLAGVRARIAARMGDRTHRMAPADRARLGPL
LAWWEGDVVPRLAAVAALPAEVELVALLAALRQAGEALAGETLWAGVAGRALAGRVEALA
AAADAVPMPVARGEAPGLLGAMLTDCAVRPPFGLDPRVAIWGPLEARLQRADALVLGGLN
EGVWPSSGAPDPWLAPMVRRALDLPTLERRVGFQAHDFISALGAPEVMLTRAGRVGSAPA
VASRFWQRLHAACGGQGAAGTLLPDAGALLTLVRQMRAATPGVMMGKPAPVPPRGVRPTR
LSVTDVAVLKADPFAFYAKHIMKLAPLEPIDVEPTAGERGTAVHRILQRWVEEPARRGDP
AGLIDEVLAGFGERPALAALWRPRVARMIDFAVALMLADEDWTAKGAEQSGAIVLGGVKL
SGKADRIDEGEEGYRIVDYKTGGLPAIAKTRTYYDPQLALLALMVASGGMEGIEAKPVVA
LDYIKLSGGRTEGKVQAAIGKEGRDVALVQAWIEGAKADFEALAARYLTGDGAFEAKLHP
VYSAASKDYDQLARLVEWLGRDG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcggcctgagcgggtcgcgctgtacaccatcccggcggagcggccgttcgtcgat
gacctggcggcggggctgctggcgacggcggccgatgcgatggcgctggcgcggacgctg
gtgctgctgccgagccggcggtcggtgcgggcgctgaccgaggcgttcgtacggcaatcg
ggggcgcgggcgctgttgctgccgcgcctggcggcggtgggcgacctggacgcggacgag
gcgctggggacctttgcggaagggctggaggaggcgccggagctgctgcccgaaatgccg
gctctggagcggcagttgctactggcggcgctgctgtccgacggagggccggcggcgcgc
ttcgcgctggcggggcagctgggggcggtgctggacacgctgaccatcgaggggcggcgg
ccggccgagctggcggagatcgatgccggcggactgtccgaccattgggcgaagaatctg
aaggtgctggagacggtgtggcgccgctggccggcggtgctgaaggcgatggggcggcag
gatgcggtcgaccggcgcaaccggctgctgcggatgctggcgcggcgctggcggcgggcg
gggccggggcatgcggtggtgatggcgggctttgcccaggccgcgccggcggtggcggaa
ctggcgggagcggtggcacggatggcggggggcacggtggtgctgccggggctggatctg
gcgctggacgccgcgggctgggcggcgatcgccggcggggaagaggcgcggcctgcggac
acgcatccgcaggcggggttggcccggctgctggcggcgatgggggtggcggcggaagag
gtgcagccgtggccgcaccggtcggacgcggcgggaagcgcagccgcgcggcgggcgctg
gtggcggcggcgctggcgccggtgcggctggcggtgcggccggcggtggcggaggcggcg
gcgctggccggggtgcagtggctggaggcggcgacgccggcggaggaagcggcggcgatc
gcgctggcgctgcggcaggtggtggcggtgcccgggaagaccgcggcgctggtgacgccg
gaccgggagttggcgcggcgggtgagggtggcgctgtcgggctatggcatcgcggtggac
gacagcgcgggggagcgggtggcggcgactccgccgggcgcgctgctggtggcgctggcg
agtgcggtggcggaggatttcgcgccggtggcgctgctgggcctgctgaagcatccgctg
gtgatgcagggcggggggcggctggactggctggagcaggtgcggacgctcgaccggctg
gtgctgcgcgggttgcggccggcgccggggctggcgggggtgcgggcgcggatcgcggcg
cggatgggcgaccggacgcatcggatggcgccggccgaccgggcgcggctggggcccctg
ctggcctggtgggagggggatgtggtgccgcggctggcggcggtggcggcgctgccggcg
gaggtcgagctggtggcgctgttggcggcgctgcggcaggccggcgaggcgctggccggc
gagacgctgtgggcgggggtggccgggcgcgcgctggcggggcgggtcgaggcgctggcg
gcggcggcggacgcggtgccgatgccggtggcgcgcggcgaggcgccggggctgctgggg
gcgatgctgacggattgcgcggtgcggccgccgttcgggctggacccgcgcgtggcaatc
tgggggccgctggaggcgcggttgcagcgggcggacgcgctggtgctgggggggttgaac
gagggggtgtggccgtcgtcgggcgcgcccgatccctggctggcgccgatggtgcggcgc
gcgctcgacctgccgacgctggagcggcgcgtgggctttcaggcgcatgacttcatcagc
gcgctgggggcgccggaggtgatgctgacgcgcgccgggcgggtggggagcgcgccggcg
gtggcgagccgtttctggcagcggctgcacgcggcgtgcggcgggcagggcgcggcgggg
acgctgctgcccgacgcgggcgcgttgctgacgctggtgcggcagatgcgggcggcgacg
ccgggggtgatgatggggaagccggcgccggtgccgccgcggggggtgcggccgacgcgg
ttgagcgtgaccgacgtggcggtgctgaaggccgatccctttgccttttacgccaaacat
atcatgaagctggcgccgctggagccgatcgatgtcgagccgacggcgggggagcgcggg
acggcggtgcatcgcatcctgcagcgctgggtggaggagccggcgcggcgcggcgacccg
gcggggttgatcgacgaggtgctggcggggttcggcgagcggccggcgctggcggcgctg
tggcggccgcgggtggcgcggatgatcgattttgccgtggcgctgatgctggcggacgag
gactggaccgcaaaaggggcagaacaatcaggcgccattgtgctggggggtgtcaagctg
agcgggaaggccgaccgcatcgacgagggcgaggaggggtatcgcatcgtcgattacaag
acgggcgggttgccggcgattgcgaaaacaaggacttattatgatccgcaactcgcgctg
ctggcgttgatggtggcgagcggtggcatggaggggatcgaggcgaaaccggtggtggcc
ttggactatatcaagctgagcggcggaaggacggaagggaaggtgcaggcggcgatcggc
aaggaggggcgggatgtcgcgctggtacaggcctggatcgagggcgcgaaggcggatttc
gaggcgctggcggcacgttatctgaccggtgatggcgcgttcgaggcgaagctgcatccg
gtctattccgctgccagcaaggattatgaccagctggcgcggctggtggaatggctgggg
cgcgatggctga
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