Sandaracinobacteroides saxicola: H3309_01420
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Entry
H3309_01420 CDS
T06739
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3309_01420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sand03021
]
H3309_01420
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_01420
Enzymes [BR:
sand01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3309_01420
Transcription machinery [BR:
sand03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3309_01420
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3309_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
TmoB
NPL
Motif
Other DBs
NCBI-ProteinID:
QMW23196
UniProt:
A0A7G5IIK4
LinkDB
All DBs
Position
285353..286408
Genome browser
AA seq
351 aa
AA seq
DB search
MSVAAVIAKNWQELKKPNALEVKAGGNRKKKAFVAEPLERGFGLTLGNALRRVLLSSLQG
AAVTAIRIDGALHEFSFLNGVREDVTDIVLNVKQIVVKMQGDQPKRLTLSATGPGEVTAG
QIAVTGDIEISNPELVICTLDQGATFNMELTVMTGKGYAPASANRPADAPIGLIPVDALF
SPVRQVAYKVENTRVGQELDYDKLTLTVETDGSVTPDDALGYAARILQDQLQLFVNFDEP
SARPVAVPVSTGMALDEPTDVSMNRNLLKKVDELELSVRSANCLKNDNIIYIGDLVQKSE
PEMLRTPNFGRKSLNEIKEVLATMGLRLGMDIPGWPPENIEELAKKLEQEF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggcagcagtgatcgcaaagaattggcaggaactgaagaagccgaacgcgctg
gaagtgaaggcgggcggcaatcgcaagaaaaaggcgtttgtggcggaaccgctggaacgt
ggtttcggcctgacgctgggcaatgcgctgcgtcgcgtgctgctgtcgagcctgcagggc
gcggcggtgacggcgatccgcatcgatggcgctctgcacgagttcagcttcctgaacggc
gtgcgggaggatgtgaccgacatcgtcctgaacgtgaagcagatcgtggtgaagatgcag
ggcgaccagccgaagcggctgacgctgtcggcgaccggccccggcgaagtgaccgccggg
cagatcgcggtgacgggtgatatcgagatttccaaccccgagctggtgatctgcacgctg
gaccagggcgcgaccttcaacatggaactaacggtgatgaccggcaagggctatgcgccc
gcgtcggccaaccgtccggccgacgcgccgatcgggctgatcccggtcgatgcgctgttc
tcccccgtgcgtcaggtggcgtacaaggtggagaatacgcgggtcgggcaagagcttgat
tatgacaagctgacgctgacggtggaaaccgacggcagcgtgacgcccgatgatgcgctg
ggctatgccgcgcgcatcctgcaggaccagttgcagctgttcgtcaacttcgacgagccg
agcgcgcggccggtggcggtgccggtatcgaccggcatggcgctggatgagccgaccgat
gtcagcatgaaccgcaacctgctgaagaaggtggatgagctggagctgtcggtgcgcagt
gccaactgtctgaagaacgacaacatcatctacatcggtgacctggtgcagaagtcggag
ccggagatgctgcgcacgccgaacttcggccgcaagagcctgaatgagatcaaggaagtg
ctggccacgatgggcctgcggctgggcatggacatcccgggctggccgccggagaatatc
gaggaactggcgaagaagctggagcaggagttttag
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