KEGG   Sandaracinobacteroides saxicola: H3309_02260
Entry
H3309_02260       CDS       T06739                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
sand  Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:sand00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sand02044]
    H3309_02260 (tssC)
Secretion system [BR:sand02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H3309_02260 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QMW24488
UniProt: A0A7G5IM96
LinkDB
Position
471833..473326
AA seq 497 aa
MATDPNALQQGAAAAAEITVDDFSALLTKEFKPRTDEAKSRVEGAVRTLAEQALAGSNVM
PGDVIGTIESMISALDRKLTEQVNMIIHHPEFQALESAWRGLEYTVMNTETSTDLKIKVM
NVSKDELRRMFSSYRGAAWDQSPLFKRVYEAEFGQLGGQPYGCLVGDYYFSQTPTDVEVL
EGMAKVSSAAHAPFISGTSPGLFQMESWQDLAKPRDLAKIFDTPEYAAWRSLRAKDDSRY
IALTMPRVLARKPYGATSEPVAEFAFEEDTAGDHDKYAWMNAAHAMAVRINAAFKEYGWC
TRIRGVQSGGTVEGLPTAMFPTEEGDTAVKCPTEIAISDRREGELSAAGLIGLIHRKNTD
QATFIGAQTLHSPKEYVDKAATANARLSARLPYLFTSCRFAHYLKCMVRDWVGGTPTAAQ
IEARLDGWVSQYVDRMPDMSSEEQKARQPLKAASVKLSEDEENPGYYRASFEFVPHFQME
GMDISLSMTSSLRQANG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgaccgatccgaacgcattgcaacagggtgcagcagccgctgccgagattaccgtc
gatgatttttcggcgctgctgaccaaggaattcaagccgcgcaccgacgaggcgaagagc
cgggtcgaaggcgcggtgcggacgctcgccgagcaggcgctggcgggcagcaatgtcatg
ccgggcgatgtcatcggcacgatcgagagcatgatctcggcgctggaccgcaagctgacc
gagcaggtgaacatgatcatccaccatcccgagttccaggcgctggagagcgcgtggcgg
gggctggaatatacggtgatgaacaccgagacctcgaccgacctgaagatcaaggtgatg
aacgtctcgaaggacgagctgcggcggatgttcagcagctatcgcggcgcggcctgggac
cagagcccgctgttcaagcgggtttacgaggcggagttcggccagctggggggccagccc
tatggctgcctggtgggcgattattatttcagccagacgccgaccgacgtcgaggtgctg
gaggggatggcgaaggtgtcgagcgcggcgcacgctccgttcatctcggggacctcgccg
gggctgttccagatggagagctggcaggacctggcgaagccgcgcgatctcgccaagatt
ttcgacacgccggaatatgccgcctggcggagcctgcgggcgaaggacgacagccgctac
atcgcgctgacgatgccgcgggtgctggcgcgcaagccctatggcgccacgtcggagccg
gtcgccgagttcgcttttgaggaggatacggcgggcgaccatgacaaatatgcctggatg
aacgcggcgcatgcgatggcggtcaggatcaacgcggcgttcaaggaatatggctggtgc
acgcgcatccgcggcgtgcagtccggcgggacggtggaggggctgccgacggcgatgttc
ccgaccgaggagggcgataccgcggtgaaatgcccgaccgagatcgcgatcagcgaccgg
cgtgagggcgaactgtcggcggcgggtctcattggcctcatccatcgcaagaacaccgac
caggcgacgttcattggcgcgcagacgctgcattcgccgaaggaatatgtcgacaaggcg
gcgacggcgaacgcgcggctgtcggcacggctgccttacctgttcaccagctgccgcttc
gcgcattatctgaagtgcatggtgcgcgactgggtgggcggcacgccgaccgcggcgcag
atcgaggcgcggctggacggctgggtgagccagtatgtcgaccggatgcccgacatgtcg
agcgaggagcagaaggcgcggcaaccgttgaaggccgcgtccgtcaagctgtccgaggac
gaggagaatcccggatattatcgtgccagctttgagttcgtgccgcatttccagatggaa
ggcatggacatctcgctgagcatgacgtcgtccctcaggcaggccaatgggtga

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