Sandaracinobacteroides saxicola: H3309_03640
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Entry
H3309_03640 CDS
T06739
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sand03016
]
H3309_03640 (rnd)
Enzymes [BR:
sand01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H3309_03640 (rnd)
Transfer RNA biogenesis [BR:
sand03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H3309_03640 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QMW23599
UniProt:
A0A7G5IJQ7
LinkDB
All DBs
Position
complement(725309..726469)
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AA seq
386 aa
AA seq
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MEIHPLVADTATLAAHCARLARADFLCIDTEFMRESTYYPQLCLIQLASPTEAFAVDPLA
PGLDLAPFLALLTDESLLKVLHAGGQDLEIFWNLTGKVPFPLFDTQVAAMALGMGEQVSY
ANLVAHYTGTQIDKGARFTDWARRPLSDRQIDYAIGDVTYLAALFPKMLDKLRRNGRGIW
LDEEMARVSDPANYANDPEEAWKRLRLPSRKPDVLGRLKALAKWRELEAQDKDVPRGRIV
KDETLADLAASPPRSQADLARIRGLSQAWANNAIGGRLMAVIAEAQPLSPEDMPAREASR
PGLSTDAALVADLLKLLLKVRAKEAGVAPKLVARAEELEALAAGTRDGLSLLDGWRRDTF
GADALALCEGRLAFVVENGRAKVRPL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcatccgctggttgccgataccgccaccctcgccgcgcactgcgcccgcctc
gcccgcgcggacttcctctgcatcgacaccgaattcatgcgcgaaagcacttattatcca
cagctttgcctgatccagctggccagcccgacggaggccttcgccgtcgacccgctcgcc
cccggcctcgacctcgcccccttcctcgccctcctcaccgacgagtcgctgctgaaagtc
ctccacgccggcgggcaggacctggaaatcttctggaacctcaccggcaaggtgcccttc
ccgctgttcgatacgcaggtcgccgccatggcgctcggcatgggcgagcaggtcagctac
gccaacctcgtcgcccattacaccggcacgcagatcgacaagggcgcccgcttcaccgac
tgggcgcgccggccgctgtccgaccgccagatcgactatgccatcggcgatgtcacctat
ttggccgcgctgttcccgaaaatgctcgacaagctgcgccgcaacggccgcggcatctgg
ctggacgaggagatggcgcgcgtcagcgacccggccaattacgccaatgatcccgaggag
gcctggaagcgcctccgcctgcccagccgcaagcccgacgtgctcggccggctgaaggcg
ctggcgaaatggcgggagctggaggcgcaggacaaggacgtgccgcgcggccgcatcgtg
aaggatgaaacgctcgccgacctcgccgcctcgccgccccggtcacaggccgacctggcg
cgcatccgcggcctgtcgcaggcctgggccaacaacgccatcggcggccgcctgatggcc
gtgattgcagaggcgcagccgctgtcgcccgaggacatgcccgcccgcgaagccagccgg
cccggcctctccaccgacgccgcgctggtcgccgacctcctgaaactgctgctgaaagtc
cgggcgaaagaggccggcgtcgcccccaagctggtcgcccgcgcggaggagctggaagcc
ctcgccgccggcacgcgcgacggcctcagcctgctcgacggctggcgccgggacaccttc
ggcgccgatgccctggcgctgtgcgaaggccgcctcgccttcgtcgtcgaaaacggccgc
gcgaaggtccggccgctttga
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