Sandaracinobacteroides saxicola: H3309_04860
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Entry
H3309_04860 CDS
T06739
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sand03009
]
H3309_04860 (rimO)
Enzymes [BR:
sand01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H3309_04860 (rimO)
Ribosome biogenesis [BR:
sand03009
]
Prokaryotic type
ribosomal protein modification factors
H3309_04860 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QMW24528
UniProt:
A0A7G5IMD6
LinkDB
All DBs
Position
974565..975833
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AA seq
422 aa
AA seq
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MVSLGCPKALVDSERILTALRGDGYAMSADYAGADVVIVNTCGFLDSAKAESLEAIGEAI
AENGRVVVTGCLGVEAERIRERFPAVLAITGPQQYEAVVGAVRDAAPMPPQPFVDLAPTK
LTPRHYSYLKISEGCNHRCAFCIIPSLRGDLASRRPDAILREAEKLVAAGTRELLVISQD
TSAYGRDLRHADYNGRRAHITDLARDLGSLGAWVRLHYVYPYASVDELIPLMADGLILPY
LDIPFQHAAPGVLRAMRRPANEARVLERLAAWRAAVPDIAIRSTFIVGFPGESETDFAYL
LQWLEEAQLDRVGAFAYENVAGAAANDLPGHVPEEEKQERLARFMETSARISAAKLAAKV
GRRIDVIIDEADGEGGATGRGQADAPEIDGQVFLRDCHAAPGDIVRVVVEDADEHDLYGV
PV
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgcttggctgccccaaggcgctggtggacagcgagcgcatcctgacggcgctg
cgcggcgatggctatgccatgtccgccgactatgccggcgccgatgtggtgatcgtcaac
acctgcggcttcttggacagcgccaaggcggaaagcttggaggcgatcggcgaggcgatc
gccgagaatggccgggtggtggtgaccggctgcctgggggtggaggcggagcgcatccgc
gaacgtttccccgcggtgctggccatcacgggtccgcagcaatatgaggcggtggtgggc
gcggtgcgggacgcggcgccgatgccgccgcagcccttcgtcgacctggcgccaaccaag
ctgacgccgcgccactacagctatctgaagatttccgaaggctgcaaccaccgttgcgcc
ttctgcatcatcccctcgctgcgcggcgatctggccagccgccggccggacgccatcctg
cgggaggcggagaagctggtggccgccggcacgcgcgaactgctggtgatctcgcaggac
acgtcggcgtatggccgcgacctgcggcatgccgactataacggccgccgcgcgcacatc
accgacctggcgcgcgacctcggcagcctgggcgcctgggtgcggctgcactatgtttac
ccttacgccagtgtggatgagctgatcccgctgatggccgatggcctgatcctgccctat
ctggacattcccttccagcatgccgcgcccggcgtgctgcgcgcgatgcgccgcccggcg
aacgaggcgagggtgctggagcggctggccgcctggcgcgcggcggtgcccgacatcgcc
atccgcagcactttcatcgtggggttccccggcgagagcgagacggatttcgcctatctt
ctgcaatggctggaggaggcccagctcgaccgggtgggggcgttcgcctatgaaaatgtt
gccggcgccgcggcgaacgacctgcccggccatgtgccggaggaggaaaagcaggagcgg
ctggcacgcttcatggaaacgagcgcccgcatctccgcggcaaagctggcggcaaaggtc
gggcgccggatcgatgtcatcatcgatgaggcggacggggagggcggcgcgacggggcgc
ggccaggccgacgcaccggaaatcgacggccaggtattcctgcgcgattgccatgccgca
ccgggcgatatcgtccgggtggtcgtggaagacgctgacgagcacgacctctacggggtg
cccgtgtga
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