Sandaracinobacteroides saxicola: H3309_05585
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Entry
H3309_05585 CDS
T06739
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand00300
Lysine biosynthesis
sand00470
D-Amino acid metabolism
sand01100
Metabolic pathways
sand01110
Biosynthesis of secondary metabolites
sand01120
Microbial metabolism in diverse environments
sand01230
Biosynthesis of amino acids
Module
sand_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H3309_05585
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H3309_05585
Enzymes [BR:
sand01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H3309_05585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6278
Motif
Other DBs
NCBI-ProteinID:
QMW23941
UniProt:
A0A7G5IKP9
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All DBs
Position
1111560..1112771
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AA seq
403 aa
AA seq
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MSGHVPPGFGVRDGALVIAGRTAEQWVAEAGDTPLFVYDRVRVAAKVSAFRAAFPGVRLH
YAMKANPFAPLLAWMAGLVDGVDVASGGELAAAVAAGAREISFAGPAKRDAELAAAIEAG
ATINLESVGEMRRAAALAAGKGLRARVAVRVNPPFELKGSGMRMGGGAKPFGVDADAVPD
MLRAMAGLPLDFRGFHIFAGSQNLDAGAIIAAQRETVALAAALAAQAPCPPALVNLGGGF
GVPYFPGDVALDVGLVGAALAEALSARPAVLAETEFALELGRWLVADAGVYLTRVVDRKM
SGGQLFLACDGGLHHQLAASGNFGTVIRRNYPLANATRFAAEPEEVANVVGCLCTPLDRL
GDRVMLPRTEEGDLIALFMAGAYGRTASPGAFLGHPPPGEIFA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcatgtgccgccggggttcggcgtgcgcgacggggcattggtgatcgccggg
cggacggcggaacaatgggtggcggaggcgggggatacgccgctgttcgtctatgaccgg
gtgcgggtggccgcgaaagtgtcggcgttccgcgcggcgtttccgggggttcggctgcac
tatgcgatgaaggccaatccgttcgcgccgctgctggcctggatggcggggctggtggat
ggggtggatgtcgcctctggcggggagctggcggcggcggtggcagcgggcgcgcgggag
atcagtttcgccgggccggcgaagagggacgcggagctggcggcggcgatcgaggcgggg
gcgacgatcaacctggagagcgttggcgagatgcggcgggccgcggcgctggcggcgggg
aagggtttgcgggcgcgggtcgcggtgcgggtgaatccgccgttcgagctgaagggcagc
ggcatgcgcatgggcggcggggcgaagccgttcggggtggatgccgacgccgtgccggac
atgttgcgggcgatggcggggctgccgctggatttccgggggtttcacatctttgccggc
agccagaacctggacgcgggtgcgatcatcgcggcgcagcgggagacggttgcgctggcg
gcggcgctagcggcgcaggccccctgcccgccggcgctggtcaatctgggcggcggattc
ggggtgccctatttccccggcgatgtcgcgctggatgtcggcctggtgggggcggcgctg
gcggaggcgctgtcggcgcggccggcggtgctggcggagaccgaattcgcgctggagctg
gggcgctggctggtggcggatgcgggcgtctatctgacgcgggtagtggaccggaaaatg
tccggcgggcagctgttcctggcgtgcgatggcgggctgcatcaccagctggcggcgagc
ggcaatttcggcacggtgatccggcgcaattatccgctggcgaacgcgacgcgttttgcc
gcagagcccgaggaggtggcgaatgtggtggggtgcctgtgcacgccgctcgacaggctg
ggggaccgggtgatgctgccgcggaccgaggagggcgacctgatcgcgctgttcatggca
ggtgcctatggccggacggcgagcccgggggcttttctggggcatccgccgccgggggag
atttttgcctga
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