Sandaracinobacteroides saxicola: H3309_10820
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Entry
H3309_10820 CDS
T06739
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sand03032
]
H3309_10820
03036 Chromosome and associated proteins [BR:
sand03036
]
H3309_10820
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_10820
DNA replication proteins [BR:
sand03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H3309_10820
Chromosome and associated proteins [BR:
sand03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H3309_10820
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H3309_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
QMW21880
UniProt:
A0A7G5IET8
LinkDB
All DBs
Position
2144447..2144728
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELVQKVADANPHLGLKDAERIVATILDSISDTLASGGRVELRGFGAFSTRARDART
GRNPRTGVAVRVDAKRVPHFKPGKELREKLNLG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctctgaactggtgcagaaggtcgctgacgccaacccgcatctgggactgaaa
gacgccgaacgaatcgtcgccaccatcctcgattcgatcagtgacacgctggccagcggc
ggtcgcgtcgagctgcgtggcttcggcgccttttccacccgcgcgcgcgatgcccgcacc
ggccgcaacccgcgcaccggcgtcgccgtcagggtggacgccaagcgtgtgccccacttc
aagcccggcaaggaattgcgcgagaagctcaacctcggctga
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integrated database retrieval system
