Sandaracinobacteroides saxicola: H3309_11225
Help
Entry
H3309_11225 CDS
T06739
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sand
Sandaracinobacteroides saxicola
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sand03009
]
H3309_11225
Enzymes [BR:
sand01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H3309_11225
Ribosome biogenesis [BR:
sand03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H3309_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
TRM5-TYW2_MTfase
ECR1_N
Motif
Other DBs
NCBI-ProteinID:
QMW21950
UniProt:
A0A7G5IF08
LinkDB
All DBs
Position
2237667..2238863
Genome browser
AA seq
398 aa
AA seq
DB search
MKRWTGVTGLAARGDGLTADGRFVPGALPGDQVGDDGEIARGPGHATPACHHFGRCGGCQ
LQHASDAVYADFTVDRILRPLAAVGIVPAEIMPVALSPPHSRRRASLRAVKSGREVALGF
NAEGSHDLIDLAECPVLNPALFALLAPLRGLLPPLMRERQTVGVTVTRVDQGVDLLLANL
SADGLRAREALTAFAQAHGLARLSVEGPAGVETVIDAGATVTLGGIAVALPPGGFLQATA
QGEAALVSAVLAGVGPARRVADLFAGAGTFALPLSATAHVEAADAAGPAIEALKAAARAA
GRPVKAVHRDLFRRPYTAAELDCFEALVIDPPRAGAAAQTAEIAASAVPRVMAVSCNPAT
FARDAERLVKSGFTLGRLWPVAQFRWSTHVELAALFLR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggtggactggcgtgacgggattggcggcgcggggcgacggcctgaccgccgac
ggccgcttcgtgcccggcgcgctgcccggcgaccaggtcggcgacgatggcgagatcgcc
cgcggccccggtcatgccacccccgcctgccaccatttcggccgctgcggtggctgccag
ctgcaacatgccagcgacgccgtctatgccgatttcaccgtcgaccgcatcctgcggccg
ctggcggcggtgggcatcgttccggcagagataatgccggtggcgctgtccccgccccac
agccgccgccgcgccagcctgcgcgcggtgaaaagcggccgcgaggtggcgctgggcttc
aatgcggaggggagccacgacctcatcgacctcgccgaatgtccggtgctcaaccctgcg
ctgttcgccctgctggcaccgctgcgcgggctgctgccgccgctgatgcgcgagcggcag
acggtgggcgtcaccgtcacccgcgtcgaccagggcgtcgacctgctgctcgccaacctc
agcgccgacggcctgcgcgcgcgcgaagcgctgaccgcctttgcccaggcccacggcctc
gcccggctttcggtggaggggccggctggcgtggagaccgtgatcgatgccggcgccacc
gtgacactggggggcattgccgtcgccctgccgccgggtggtttcctgcaggccacggcg
cagggcgaggcggcactggtttcggcggtgctggcgggcgtcggcccggcccgccgcgtc
gccgacctgttcgccggggccggcaccttcgcgctgccgctctccgccaccgcccatgtg
gaggccgccgacgccgccgggcccgccatcgaggcgctcaaagctgccgcccgtgccgcc
ggacgcccggtgaaggccgtgcaccgcgacctgttccgccggccctacactgccgccgag
ctggactgcttcgaggcgctggtgatcgacccgccgcgcgccggcgccgccgcgcagacc
gccgaaatcgccgccagtgccgttccccgcgtgatggcggtcagctgcaaccccgccacc
ttcgcccgcgatgcggaacggctggtgaaatccggtttcacccttggacggctgtggccg
gtggcgcagttccgctggtcgacgcatgtagagcttgcggcactttttctgcgctga
DBGET
integrated database retrieval system
